LOCUS AK300348 3579 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ61709 complete cds, highly similar to Homo
sapiens elongation factor Tu GTP binding domain containing 1,
transcript variant 1, mRNA.
ACCESSION AK300348
VERSION AK300348.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3579)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3579
/clone="PLACE7007382"
/clone_lib="PLACE7"
/db_xref="H-InvDB:HIT000494972"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="placenta"
CDS 80..3442
/codon_start=1
/note="highly similar to Homo sapiens elongation factor
Tu GTP binding domain containing 1, transcript variant 1,
mRNA"
/protein_id="BAH13266.1"
/transl_table=1
/translation="MVLNSLDKMIQLQKNTANIRNICVLAHVDHGKTTLADCLISSNG
IISSRLAGKLRYMDSREDEQIRGITMKSSAISLHYATGNEEYLINLIDSPGHVDFSSE
VSTAVRICDGCIIVVDAVEGVCPQTQAVLRQAWLENIRPVLVINKIDRLIVELKFTPQ
EAYSHLKNILEQINALTGTLFTSKVLEERAERETESQVNPNSEQGEQVYDWSTGLEDT
DDSHLYFSPEQGNVVFTSAIDGWGFGIEHFARIYSQKIGIKKEVLMKTLWGDYYINMK
AKKIMKGDQAKGKKPLFVQLILENIWSLYDAVLKKDKDKIDKIVTSLGLKIGAREARH
SDPKVQINAICSQWLPISHAVLAMVCQKLPSPLDITAERVERLMCTGSQTFDSFPPET
QALKAAFMKCGSEDTAPVIIFVSKMFAVDAKALPQNKPRPLTQEEIAQRRERARQRHA
EKLAAAQGQAPLEPTQDGSAIETCPKGDEPRGDEQQVESMTPKPVLQEENNQESFIAF
ARVFSGVARRGKKIFVLGPKYSPLEFLRRVPLGFSAPPDGLPQVPHMAYCALENLYLL
MGRELEYLEEVPPGNVLGIGGLQDFVLKSATLCSLPSCPPFIPLNFEATPIVRVAVEP
KHPSEMPQLVKGMKLLNQADPCVQILIQETGEHVLVTAGEVHLQRCLDDLKERFAKIH
ISVSEPIIPFRETITKPPKVDMVNEEIGKQQKVAVIHQMKEDQSKIPEGIQVDSDGLI
TITTPNKLATLSVRAMPLPEEVTQILEENSDLIRSMEQLTSSLNEGENTHMIHQKTQE
KIWEFKGKLEQHLTGRRWRNIVDQIWSFGPRKCGPNILVNKSEDFQNSVWTGPADKAS
KEASRYRDLGNSIVSGFQLATLSGPMCEEPLMGVCFVLEKWDLSKFEEQGASDLAKEG
QEENETCSGGNENQELQDGCSEAFEKRTSQKGESPLTDCYGPFSGQLIATMKEACRYA
LQVKPQRLMAAMYTCDIMATGDVLGRVYAVLSKREGRVLQEEMKEGTDMFIIKAVLPV
AESFGFADEIRKRTSGLASPQLVFSHWEIIPSDPFWVPTTEEEYLHFGEKADSENQAR
KYMNAVRKRKGLYVEEKIVEHAEKQRTLSKNK"
BASE COUNT 1122 a 734 c 857 g 866 t
ORIGIN
1 agctctcggt gtgggtgcga cccgagagaa ggagcggggc tggtggggct gctgcagccg
61 tcacaggaaa taagtaatca tggtgctcaa cagtttggat aagatgattc aactccagaa
121 aaacactgcc aacatcagga atatttgtgt tttggctcat gttgaccatg gaaaaactac
181 tctggctgac tgtcttatat ctagcaatgg aatcatctcc agccgcctag caggcaagtt
241 aaggtacatg gacagcagag aagatgaaca gatccgaggg atcactatga aatccagtgc
301 catttcccta cattatgcaa caggtaatga ggagtacctg atcaatctga tagactctcc
361 aggacacgtg gacttttcct cagaagtatc aaccgctgtt cgcatttgtg atggatgcat
421 cattgtggta gatgctgtgg aaggagtctg tccacagaca caggcagttc tgcgacaagc
481 ttggcttgaa aacatccgtc cggttttagt gattaataag attgatcgct tgatagtgga
541 actgaaattc accccacaag aggcctattc tcacctcaag aatattttag aacagattaa
601 tgcgctcaca gggactcttt ttacttctaa agtcctagaa gaaagagcag agagggagac
661 tgaatcccaa gtgaatccaa attctgaaca aggagagcaa gtatatgact ggagcactgg
721 cttggaggac acagatgatt ctcaccttta cttctctcca gaacagggaa atgtggtgtt
781 taccagtgca atagatgggt ggggctttgg aattgagcac ttcgccagaa tctacagtca
841 aaaaattggc atcaaaaagg aagttcttat gaaaaccttg tggggagatt actatataaa
901 tatgaaggct aaaaagatca tgaagggtga tcaggccaaa ggaaagaaac ctttatttgt
961 acagttgatc ctggaaaata tatggagttt gtatgatgct gttttgaaaa aggacaaaga
1021 caaaattgat aaaatagtga cttctttagg attaaaaatt ggagcccggg aggcacgaca
1081 ttcagaccct aaagttcaga tcaacgccat ttgcagtcag tggctaccca tatcccatgc
1141 tgttcttgct atggtgtgtc agaaacttcc tagtcccctt gatattacag ctgagagagt
1201 ggagagactg atgtgcacag gatcacaaac ttttgactct tttccaccag aaactcaagc
1261 actgaaagca gcttttatga aatgtggaag tgaggacact gctccagtta ttatatttgt
1321 ttccaaaatg tttgcagttg atgctaaggc cttgcctcag aataagccaa ggcctctcac
1381 tcaagaagaa attgctcaga gacgtgagcg tgcaagacaa aggcatgcag agaagcttgc
1441 agcagcacag ggacaggcac ccttggagcc cacccaagat gggagtgcca ttgaaacatg
1501 tccaaaagga gacgagccaa gaggtgacga gcaacaggtg gaaagtatga cccctaaacc
1561 tgtgctccag gaagaaaaca accaagagtc ttttattgca tttgctcggg tgttcagtgg
1621 tgtggctcga agaggaaaga aaatttttgt cttggggccc aaatacagtc ctcttgagtt
1681 tttacgaagg gtaccattag gcttctcagc tccaccagat ggcctccccc aagtccccca
1741 catggcatac tgtgctctgg aaaacctgta tcttctgatg ggaagggaac tggaatatct
1801 agaggaggta cctccaggaa atgtgctagg aataggaggc cttcaagatt ttgtgctgaa
1861 atctgcaaca ctgtgtagcc tgccatcctg cccaccattt ataccactca acttcgaagc
1921 cactcctatt gtgagagttg ctgttgaacc aaaacatcca agtgaaatgc ctcagctcgt
1981 aaaaggaatg aaactgttaa accaggctga tccctgtgtc cagattttaa ttcaggaaac
2041 gggagagcac gttttagtca cagcaggaga agtccacctt cagcgatgcc tggatgactt
2101 aaaagaaagg tttgcaaaga ttcatatcag tgtatctgaa cctattattc cattcagaga
2161 aacaatcaca aaacccccaa aagttgacat ggtcaatgaa gaaataggca aacagcaaaa
2221 agttgcagtc atacaccaaa tgaaagaaga tcaaagcaaa atccctgaag gaatccaagt
2281 tgactctgac gggctaatca ccataacaac tcccaataaa cttgccacgc tcagtgttcg
2341 agccatgccc cttccagaag aagtcaccca gattctggaa gaaaatagtg atttgattcg
2401 ttctatggag cagttgacat cctctttgaa tgagggcgaa aatactcaca tgattcatca
2461 gaagacccaa gagaaaattt gggaattcaa aggaaaactg gagcaacacc taacagggag
2521 aagatggagg aacattgttg accaaatctg gtcatttggc ccaagaaaat gtgggcccaa
2581 catactagtc aataaaagtg aagattttca gaactcagta tggacaggtc cagctgacaa
2641 agcttcaaaa gaagccagta gataccgaga tttgggcaat agcattgtga gtggcttcca
2701 actagcaacc ctctctggcc ccatgtgtga ggagcctctc atgggtgtct gttttgttct
2761 ggaaaaatgg gacctaagta aatttgagga acaaggagca agtgatctgg caaaagaggg
2821 acaggaggaa aatgaaacct gttctggtgg aaatgaaaac caagagctac aagatggctg
2881 ctctgaggcc tttgagaaga ggacatcaca gaaaggagaa tctccactca ctgactgcta
2941 tggacctttc tcaggacagc taattgccac catgaaagaa gcatgtcgct atgcactgca
3001 agtgaaacct cagcgcctga tggcagctat gtacacatgt gacatcatgg ccactggtga
3061 tgttctcggt cgagtctatg ctgtcttgtc aaagagagaa ggtcgggtac ttcaagaaga
3121 aatgaaagaa gggacagaca tgttcatcat caaggctgtg ctgcctgttg ctgaaagctt
3181 tggttttgct gatgaaatca ggaagaggac aagtggcctg gccagcccac aactagtatt
3241 cagccattgg gagatcattc ccagtgaccc cttctgggtg ccaactactg aggaggaata
3301 cttgcacttt ggggagaagg ctgactctga gaaccaagcc cggaagtaca tgaacgcagt
3361 acgaaagcgg aaggggcttt atgtggaaga aaagattgtg gagcatgcag aaaagcagag
3421 gacactcagc aaaaataagt agctacctac tactggtgga ttcttttcct tatagtgaat
3481 ttaaaagtat catcaagggt ttaatattgg gaaaatttct ttttgccaca ttatctctgt
3541 ttattcactt tcaataaagt tgatccatat aaatatttt
//