LOCUS AK300345 4418 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ61708 partial cds, highly similar to Tensin-1.
ACCESSION AK300345
VERSION AK300345.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4418)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..4418
/clone="PLACE7007254"
/clone_lib="PLACE7"
/db_xref="H-InvDB:HIT000494969"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="placenta"
CDS 396..>4418
/codon_start=1
/note="highly similar to Tensin-1"
/protein_id="BAH13264.1"
/transl_table=1
/translation="MSVSRTMEDSCELDLVYVTERIIAVSFPSTANEENFRSNLREVA
QMLKSKHGGNYLLFNLSERRPDITKLHAKVLEFGWPDLHTPALEKICSICKAMDTWLN
ADPHNVVVLHNKGNRGRIGVVIAAYMHYSNISASADQALDRFAMKRFYEDKIVPIGQP
SQRRYVHYFSGLLSGSIKMNNKPLFLHHVIMHGIPNFESKGGCRPFLRIYQAMQPVYT
SGIYNIPGDSQTSVCITIEPGLLLKGDILLKCYHKKFRSPARDVIFRVQFHTCAIHDL
GVVFGKEDLDDAFKDDRFPEYGKVEFVFSYGPEKIQGMEHLENGPSVSVDYNTSDPLI
RWDSYDNFSGHRDDGMEEVVGHTQGPLDGSLYAKVKKKDSLHGSTGAVNATRPTLSAT
PNHVEHTLSVSSDSGNSTASTRTDKTDEPVPGASSATAALSPQEKRELDRLLSGFGLE
REKQGAMYHTQHLRSRPAGGSAVPSSGRHVVPAQVHVNGGALASERETDILDDELPNQ
DGHSAGSMGTLSSLDGVTNISEGGYPEALSPLTNGLDKSYPMEPMVNGGGYPYESASR
AGPAHAGHTAPMRPSYSAQEGLAGYQREGPHPAWPQPVTTSHYAHDPSGMFRSQSFSE
AEPQLPPAPVRGGSSREAVQRGLNSWQQQQQQQQQPRPPPRQQERAHLESLVASRPSP
QPLAETPIPSLPEFPRAASQQEIEQSIETLNMLMLDLEPASAAAPLHKSQSVPGAWPG
ASPLSSQPLSGSSRQSHPLTQSRSGYIPSGHSLGTPEPAPRASLESVPPGRSYSPYDY
QPCLAGPNQDFHSKSPASSSLPAFLPTTHSPPGPQQPPASLPGLTAQPLLSPKEATSD
PSRTPEEEPLNLEGLVAHRVAGVQAREKQPAEPPAPLRRRAASDGQYENQSPEATSPR
SPGVRSPVQCVSPELALTIALNPGGRPKEPHLHSYKEAFEEMEGTSPSSPPPSGVRSP
PGLAKTPLSALGLKPHNPADILLHPTGEPRSYVESVARTAVAGPRAQDSEPKSFSAPA
TQAYGHEIPLRNGTLGGSFVSPSPLSTSSPILSADSTSVGSFPSGESSDQGPRTPTQP
LLESGFRSGSLGQPSPSAQRNYQSSSPLPTVGSSYSSPDYSLQHFSSSPESQARAQFS
VAGVHTVPGSPQARHRTVGTNTPPSPGFGWRAINPSMAAPSSPSLSHHQMMGPPGTGF
HGSTVSSPQSSAATTPGSPSLCRHPAGVYQVSGLHNKVATTPGSPSLGRHPGAHQGNL
ASGLHSNAIASPGSPSLGRHLGGSGSVVPGSPCLDRHVAYGGYSTPEDRRPTLSRQSS
ASGYQAPSTPSLLFNIKSDVV"
BASE COUNT 922 a 1495 c 1191 g 810 t
ORIGIN
1 agttgctccc agcagtggcc ctgggaccag ctctgctcct tgcaccccgc tccctgcctg
61 gacacaggct cactcgctgc cttcttctgg gggaaaccag cttcttgcca gccacagctg
121 ctgcctccgc cactggccac cgcccctgtc ctgggagtcc cttggcccag acacccacct
181 gacttagtgg ctcctctgca ggaaaggtgg ctgccccctg cgttcctcca tccaaccatg
241 agctggtgcc catcaccact gagaatgcac caaagaatgt agtggacaag ggagaaggag
301 cctcccgggg tggaaacaca cggaaaagcc tcgaggacaa cggctccacc agggtcaccc
361 cgagtgtcca gccccacctc cagcccatca gaaacatgag tgtgagccgg accatggagg
421 acagctgtga gctggacctg gtgtacgtca cagagaggat catcgctgtc tccttcccca
481 gcacagccaa tgaggagaac ttccggagca acctccgtga ggtggcgcag atgctcaagt
541 ccaaacatgg aggcaactac ctgctgttca acctctctga gcggagacct gacatcacga
601 agctccatgc caaggtactg gaatttggct ggcccgacct ccacacccca gccctggaga
661 agatctgcag catctgtaag gccatggaca catggctcaa tgcagaccct cacaatgtcg
721 ttgttctaca caacaaggga aaccgaggca ggataggagt tgtcatcgcg gcttacatgc
781 actacagcaa catttctgcc agtgcggacc aggctctgga ccggtttgca atgaagcggt
841 tctatgagga taagattgtg cccattggcc agccatccca aagaaggtac gtgcattact
901 tcagtggcct gctctccggc tccatcaaaa tgaacaacaa gcccttgttt ctgcaccacg
961 tgatcatgca cggcatcccc aactttgagt ctaaaggagg atgtcggcca tttctccgca
1021 tctaccaggc catgcaacct gtgtacacat ctggcatcta caacatccca ggagacagcc
1081 agactagcgt ctgcatcacc atcgagccag gactgctctt gaagggagac atcttgctga
1141 agtgctacca caagaagttc cgaagcccag cccgagacgt catcttccgt gtgcagttcc
1201 acacctgtgc catccatgac ctgggggttg tctttgggaa ggaggacctt gatgatgctt
1261 tcaaagatga tcgatttcca gagtatggca aagtggagtt tgtattttct tatgggccag
1321 agaaaattca aggcatggag cacctggaga acgggccgag cgtgtctgtg gactataaca
1381 cctctgaccc cctcatccgc tgggactcct acgacaactt cagtgggcat cgagatgacg
1441 gcatggagga ggtggtggga cacacgcagg ggccactaga tgggagcctg tatgctaagg
1501 tgaagaagaa agactccctg cacggcagca ccggggctgt taatgccaca cgtcctacac
1561 tgtcggccac ccccaaccac gtggaacaca cgctttctgt gagcagcgac tcgggcaact
1621 ccacagcctc caccaggacc gacaagaccg acgagcctgt ccccggggcc tccagtgcca
1681 ctgctgcctt gagtccccag gagaagcggg agctggaccg cctgctgagt ggctttggct
1741 tagagcgaga gaagcaaggc gccatgtacc acacccagca cctcaggtcc cgcccagcag
1801 ggggctcggc tgtgccctcc tctggacgcc acgttgtccc agcccaggtt catgtcaatg
1861 gtggggcgtt agcatctgag cgggagacag acatcctgga cgatgaattg ccaaaccagg
1921 atggtcacag tgcgggcagc atgggcacac tctcttctct ggacggggtc accaacatca
1981 gtgagggggg ctacccagag gccctgtccc cactgaccaa cggtctggac aagtcctacc
2041 ccatggagcc tatggtcaat ggaggaggct acccctacga gtctgccagc cgggcggggc
2101 ctgcccatgc tggccacacg gcccccatgc ggccctccta ctctgcacag gagggtttag
2161 ctggctacca gagggagggg ccccacccag cctggccaca gccagtgacc acctcccact
2221 atgcccatga ccccagcggt atgttccgct ctcaatcctt ttcggaagct gaaccccagc
2281 tgcccccagc tccggtccga gggggaagca gccgggaggc tgtacaaagg ggactgaatt
2341 catggcagca gcagcagcag cagcagcagc agcctcgccc acctccacgc cagcaggaaa
2401 gagcccactt ggagagtctt gtagccagca ggcccagccc tcagccattg gcagagaccc
2461 ccatccccag tctccctgag ttcccgcgag cagcctccca gcaggagatt gaacagtcca
2521 tcgaaacact caacatgctg atgctggacc tggagccagc ctccgctgct gccccactac
2581 acaagtccca gagtgtcccc ggggcctggc caggggcttc tccactctcc tcccagcccc
2641 tctctggatc ctctcgtcag tcccatccac tgacccagtc cagatctggc tatatcccca
2701 gtgggcattc gttgggaacc cctgagccag ccccacgggc ctctctggag tctgtccctc
2761 ctggcaggtc ttactcacct tatgactatc agccatgttt ggctgggcct aaccaggatt
2821 tccattcaaa gagcccagcc tcttcctcct tgcctgcctt ccttccgacc acccacagcc
2881 ctccagggcc tcagcaaccc ccagcctctc tccctggcct cactgctcag cctctgctct
2941 caccaaagga agcaacttca gacccctccc ggactccaga ggaggagcca ttgaatttag
3001 aagggctggt ggcccacagg gtagcagggg tacaggctcg ggagaagcag cctgcagagc
3061 ccccagcccc tctgcggagg cgggcggcca gtgatggaca gtatgagaac cagtctccag
3121 aagccacatc ccctcgtagc cctggggttc gctcccctgt ccagtgtgtc tccccggagc
3181 tggctcttac catcgctctc aatcctggag ggcgccccaa agagccccat ttgcacagct
3241 acaaggaggc cttcgaggag atggagggaa cctccccgag cagcccacca cccagtgggg
3301 tgcggtcccc cccgggtctg gccaagacac ccctgtctgc tctgggcctg aaacctcaca
3361 acccagcgga catcctgttg caccccacag gagagccccg gagctatgtg gagtctgtgg
3421 cacggacagc ggtggctgga ccccgagctc aggactctga gcccaagagc tttagtgctc
3481 cagccaccca ggcctatggc catgagatac ccctgaggaa cgggaccctg ggtggctcct
3541 ttgtctcccc cagccccctc tccaccagca gccccatcct cagtgctgac agcacttcag
3601 tggggagttt cccgtcggga gagagcagtg accagggtcc ccggacgccc acccagcctc
3661 tgttggagtc tggcttccgc tcaggcagcc tgggacagcc cagcccgtct gcccagagaa
3721 actaccagag ctcttctcct ctcccgactg tgggcagtag ctacagcagc cccgactact
3781 cacttcagca tttcagctcc tctccggaaa gccaggctcg agctcagttc agtgtggctg
3841 gcgtccacac ggtgcctggg agccctcagg cgcgccacag aacagtgggc accaacactc
3901 cccctagtcc tggcttcggc tggcgggcca tcaatcccag catggctgcc cccagcagtc
3961 ccagtttgag ccatcaccag atgatgggtc caccaggcac tggcttccat ggtagcactg
4021 tctccagccc ccagagcagt gcagcgacca ccccggggag ccccagcctg tgtcggcacc
4081 cagcaggggt ctaccaggtt tctggcctcc acaacaaagt ggccaccacc ccggggagtc
4141 ccagcctggg ccggcaccct ggggctcacc aaggcaacct ggcctccggt cttcatagca
4201 atgcaatagc cagccctgga agccccagcc tgggccgtca cctcggaggg tctggatctg
4261 tggttcccgg cagcccctgc ttggaccggc atgtggccta tggtggctat tctaccccgg
4321 aggatcggag acccacactg tcccggcaga gcagtgcctc tggctaccag gctccttcca
4381 cgccctcctt actttttaat ataaagagtg atgttgta
//