LOCUS AK300337 904 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ58940 complete cds, highly similar to Homo
sapiens sphingomyelin phosphodiesterase 4, neutral membrane,
transcript variant 2, mRNA.
ACCESSION AK300337
VERSION AK300337.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 904)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..904
/clone="PLACE7006742"
/clone_lib="PLACE7"
/db_xref="H-InvDB:HIT000494961"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="placenta"
CDS 276..695
/codon_start=1
/note="highly similar to Homo sapiens sphingomyelin
phosphodiesterase 4, neutral membrane, transcript variant
2, mRNA"
/protein_id="BAG62082.1"
/transl_table=1
/translation="MEFLDTGGPMMKLVYKLQAEDYKFDFPVSYLPGPVKASIQECIL
PDSPLYHSKVQFTPTGGLGLNLALNPFEYYIFFFALSLITQKPLPVSLHVRTSDCAYF
ILVDRYLSWFLPTEGSVPCHSPPAQGGPAPHRLPGFC"
BASE COUNT 183 a 273 c 227 g 221 t
ORIGIN
1 gttttggggc ggtggcggaa tggcggcttc cacctctgaa gcgggcgacg ctatgggtcc
61 cacaggccag cctgaaagct gactctataa ataagccctt tgcacagcag tgccaagact
121 tgattaaagt cattgaggat tttccagcaa aggagctgca caccatcttc ccatggctgg
181 tagagagcat tttcggcagc ctagatggtg tcctcgttgg ctggaacctc cgctgcttac
241 aggggcgtgt gaatcctgtg gagtacagca tcgtgatgga atttctcgac actggtggcc
301 caatgatgaa gttggtttat aagcttcaag ctgaagacta taagttcgac tttcctgtct
361 cctacctgcc tggtcctgtg aaggcgtcca tccaggagtg catcctccct gacagtcctc
421 tgtaccacag caaggtccag ttcaccccta ctgggggcct tggtctgaac ctggccctga
481 atccattcga gtattacata ttcttctttg ccttgagcct catcactcag aagccactcc
541 ctgtgtccct ccacgtccgt acttcagact gtgcctattt catcctggtg gacaggtacc
601 tgtcatggtt cctgcccacc gaaggcagtg tgccctgcca ctctcctcca gcccaggggg
661 gaccagcccc tcaccgcctc ccaggttttt gttgaaatgt ggcttcatca ctattccttg
721 gagatgtatc aaaaaatgca gtcccctcat gccaaggagt cgttcacgcc tactgaggag
781 catgtgttgg tggtgcgcct gctgctgaag cacctgcacg cctttgccaa cagcctgaag
841 ccagagcagg cctcaccctc cgcccactcc cacgccacca gccccctgga ggagttcaaa
901 cggg
//