LOCUS AK300324 4294 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ53576 complete cds, highly similar to Zinc
finger protein 406.
ACCESSION AK300324
VERSION AK300324.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4294)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..4294
/clone="PLACE7005766"
/clone_lib="PLACE7"
/db_xref="H-InvDB:HIT000494948"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="placenta"
CDS 142..3837
/codon_start=1
/note="highly similar to Zinc finger protein 406"
/protein_id="BAH13257.1"
/transl_table=1
/translation="MCKCCNLFSPNQSELLSHVSEKHMEEGVNVDEIIIPLRPLSTPE
PPNSSKTGDEFLVMKRKRGRPKGSTKKSSTEEELAENIVSPTEDSPLAPEEGNSLPPS
SLECSKCCRKFSNTRQLRKHICIIVLNLGEEEGEAGNESDLELEKKCKEDDREKASKR
PRSQKTEKVQKISGKEARQLSGAKKPIISVVLTAHEAIPGATKIVPVEAGPPETGATN
SETTSADLVPRRGYQEYAIQQTPYEQPMKSSRLGPTQLKIFTCEYCNKVFKFKHSLQA
HLRIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGEKFACDYCSFTCLSKGHLKVHIE
RVHKKIKQHCRFCKKKYSDVKNLIKHIRDAHDPQDKKVKEALDELCLMTREGKRQLLY
DCHICERKFKNELDRDRHMLVHGDKWPFACELCGHGATKYQALELHVRKHPFVYVCAV
CRKKFVSSIRLRTHIKEVHGAAQEALVFTSSINQSFCLLEPGGDIQQEALGDQLQLVE
EEFALQGVNALKEEACPGDTQLEEGRKEPEAPGEMPAPAVHLASPQAESTALPPCELE
TTVVSSSDLHSQEVVSDDFLLKNDTSSAEAHAAPEKPPDMQHRSSVQTQGEVITLLLS
KAQSAGSDQESHGAQSPLGEGQNMAVLSAGDPDPSRCLRSNPAEASDLLPPVAGGGDT
ITHQPDSCKAAPEHRSGITAFMKVLNSLQKKQMNTSLCERIRKVYGDLECEYCGKLFW
YQVHFDMHVRTHTREHLYYCSQCHYSSITKNCLKRHVIQKHSNILLKCPTDGCDYSTP
DKYKLQAHLKVHTALDKRSYSCPVCEKSFSEDRLIKSHIKTNHPEVSMSTISEVLGRR
VQLKGLIGKRAMKCPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKA
HMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTADGKQFKCTVCDYTAAQKPQLLRH
MEQHVSFKPFRCAHCHYSCNISGSLKRLYNRKHPNEEYANVGTGELAAEVLIQQGGLK
CPVCSFVYGTKWEFNRHLKNKHGLKVVEIDGDPKWETATEAPEEPSTQYLHITEAEED
VQGTQAAVAALQDLRYTSESGDRLDPTAVNILQQIIELGAETHDATALASVVAMAPGT
VTVVKQVTEEEPSSNHTVMIQETVQQASVELAEQHHLVVSSDDVEGIETVTVYTQGGE
ASEFIVYVQEAMQPVEEQAVEQPAQEL"
BASE COUNT 1112 a 1186 c 1160 g 836 t
ORIGIN
1 gtgcaggagt ctgagaagaa agggtgtaga tggagaggcg gtggcctcac ctctgcatgc
61 tccgtgggaa gcggcggagg cgcccagcat ccctcctact ctgcccttgg tggaggttta
121 cgagaaaaca cggccatctt tatgtgtaaa tgttgtaacc tcttctcacc aaatcagtcg
181 gaactcctct cccacgtttc agagaagcac atggaagaag gggttaatgt tgatgagatt
241 attattcccc ttaggcctct gagtacacct gaacccccca actcaagcaa aaccggagat
301 gagtttttgg tcatgaagag gaagagaggc aggcctaagg ggtccacgaa gaagtccagc
361 acagaagagg agctggcaga aaacatcgtg agtccgactg aggacagccc gctggctccg
421 gaggaaggga acagcctgcc tccaagcagc ttggagtgta gcaagtgctg tcggaagttc
481 tccaacacgc gccagctgcg gaagcacatc tgcattatcg tgctgaattt gggtgaggag
541 gaaggagaag caggtaacga gtctgacctt gaactagaaa agaagtgtaa ggaagatgat
601 cgggaaaaag cctcgaaaag accacggtca cagaaaacag agaaagtcca gaagatctca
661 ggaaaggagg ccagacagct ttctggggcg aagaaaccca tcataagtgt ggttttaact
721 gcacacgaag caattccagg tgctaccaag attgtgccag tggaggctgg gccccctgaa
781 acgggagcta caaattctga gaccacttca gcagacctgg tgcctcggag aggctaccag
841 gaatacgcca ttcagcagac accttatgag caaccaatga agtcaagcag gctaggtccc
901 actcagctca aaatcttcac ttgtgaatac tgcaacaagg tcttcaagtt caagcactcg
961 ctgcaggccc acctgaggat ccacaccaat gaaaagccat acaagtgccc ccagtgcagc
1021 tatgccagtg ccatcaaggc caacctcaat gtgcacctgc gcaagcacac tggagagaag
1081 ttcgcctgcg actattgctc gttcacctgc ctgagcaagg gccacctcaa ggtgcacatc
1141 gagcgagtgc acaagaagat caagcagcac tgccgcttct gcaagaagaa gtactctgac
1201 gtcaagaacc tcatcaagca catccgagac gcgcatgacc cacaggacaa gaaggtcaaa
1261 gaggccttgg acgagctctg cctgatgacg agggagggca agcggcagct gctctatgac
1321 tgccacatct gtgagcgcaa gttcaagaac gagctggacc gcgaccgcca tatgctggtc
1381 cacggagaca agtggccttt tgcctgtgag ctctgtggcc atggggccac caagtaccag
1441 gcgctggaac tgcatgtcag gaagcacccc ttcgtgtacg tctgtgccgt ctgccgcaag
1501 aagttcgtca gctccatcag gctgcgcacc cacatcaaag aggtgcacgg ggctgcccag
1561 gaggccttgg tcttcaccag ttccatcaac cagagcttct gcctcctgga acctggtggg
1621 gacatccagc aagaagctct gggggaccag ctacagctgg tggaagagga gtttgccctc
1681 cagggcgtga atgcactcaa ggaagaggcc tgtcctgggg acactcagct ggaggagggc
1741 cggaaggagc cggaggcccc tggggaaatg cctgccccag ctgtgcacct ggcctccccg
1801 caggccgaaa gcacagccct gccaccctgt gagctggaaa ccaccgtggt ctcctcctca
1861 gacctgcatt ctcaagaggt ggtttcagat gattttttgt tgaaaaatga tacctcctcc
1921 gcagaggctc atgctgctcc tgagaagccc ccagacatgc agcacagaag ctcagtccag
1981 acgcaaggtg aagtgatcac actactgctg tccaaggccc agagtgctgg gtcagatcag
2041 gaaagccatg gcgcccagag ccccctaggg gaagggcaga acatggctgt gctttcagct
2101 ggtgacccag atcccagcag gtgtctcagg tcaaacccag ctgaggcctc agacctcctc
2161 cctccagtag ctggtggtgg ggacaccatc acacatcagc ctgactcttg caaagctgcc
2221 cctgagcacc ggtcaggcat caccgctttc atgaaggtcc tgaacagttt acagaagaag
2281 caaatgaaca ccagcttgtg tgagcggatc cggaaggttt atggagacct ggagtgtgaa
2341 tactgtggca aacttttttg gtaccaagtg cattttgata tgcatgtccg cacccacacc
2401 cgggaacatc tgtattattg ctctcagtgt cattattctt ccatcaccaa aaactgcctt
2461 aaacgccacg taattcagaa acacagtaac atcttgctga agtgtcccac cgatggctgt
2521 gactactcaa ctccagataa atataagcta caggcacatc ttaaagttca cacagcactg
2581 gacaaaagga gttattcttg tcctgtttgt gaaaagtctt tttcagagga tcgattgata
2641 aagtcacata tcaagaccaa ccatcctgag gtctccatga gcaccatttc tgaggttctc
2701 gggaggaggg ttcagctgaa agggctaatt ggaaagagag ccatgaaatg cccatattgt
2761 gacttttatt tcatgaagaa tggctcagac cttcagcgtc atatttgggc tcatgaaggt
2821 gtgaagccct tcaagtgttc tttgtgtgag tatgcaactc gtagcaagag taacctcaag
2881 gctcatatga atcgtcacag cactgagaaa acccacctat gtgacatgtg tggcaagaaa
2941 ttcaaatcaa aagggacact gaaaagtcac aaactccttc acactgcaga tgggaagcag
3001 tttaagtgca cggtgtgtga ctacacagcg gcccagaagc cacagctgct gcggcacatg
3061 gaacagcatg tctccttcaa gcctttccgc tgtgcccatt gccattactc ctgcaacata
3121 tctggctctc tgaagcggct ctacaacagg aagcacccta atgaggagta tgccaacgtg
3181 ggcaccgggg agctggcagc ggaggtgctc atccagcaag gtggtttgaa gtgtcctgtt
3241 tgcagctttg tatatggcac caaatgggag ttcaataggc acttgaagaa caaacatggc
3301 ttgaaggtgg tggaaattga tggagacccc aagtgggaga cagcaacaga agctcctgag
3361 gagccctcca cccagtatct ccacatcaca gaggccgaag aagacgttca agggacacag
3421 gcagcggtgg ccgcgctcca ggacctgaga tacacctctg agagtggcga ccgactggac
3481 cccacggccg tgaacatcct gcagcagatc attgagctgg gcgccgagac ccatgacgcc
3541 actgcccttg cctcggtggt tgccatggca ccagggacgg tgactgtggt taagcaggtc
3601 accgaggagg agcccagctc caaccacacg gtcatgatcc aggagacggt ccagcaagcg
3661 tccgtggagc ttgccgagca gcaccacctg gtggtgtcct ccgacgacgt ggagggcatt
3721 gagacggtga ctgtctacac gcagggcggg gaggcctcgg agttcatcgt ctacgtgcag
3781 gaggccatgc agcctgtgga ggagcaggct gtggagcagc cggcccagga actctagagg
3841 acatgtggca tcggatggcc acagggcggg gctgccaggc tctgcaggca cccagggtgg
3901 ggaggccacc cttcctgccc tacccgcaga atggtgctct cctttgccct ccctgcccag
3961 cagcctgata ggactctcct agtccaactt ggggtgggca aggcagtcag catcaccagc
4021 aataccacag gaccctcacc ccagcataga cacacacccc ctgaccctta ccatctgctt
4081 cctgaaagac ttcagtgtca gctcccctac acacacccca caccttcacc ccttgcttca
4141 agattcaaac agagactccc agtccccctc agcatcttcc ctgaatcaca gccccagctc
4201 cttgaccccc atctaggtgc caaatgttca tctgcaaccg ctatgcagtc tggtgagagg
4261 gagacagcca tcacatagaa agtgaccgta cggg
//