LOCUS AK300278 3666 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ61391 complete cds, highly similar to Protein
transport protein Sec24B.
ACCESSION AK300278
VERSION AK300278.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3666)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3666
/clone="PLACE7001799"
/clone_lib="PLACE7"
/db_xref="H-InvDB:HIT000494902"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="placenta"
CDS 97..3645
/codon_start=1
/note="highly similar to Protein transport protein Sec24B"
/protein_id="BAG62038.1"
/transl_table=1
/translation="MQVPSGYGLHHQNYIAPSGHYSQGPGKMTSLPLDTQCGDYYSAL
YTVPTQNVTPNTVNQQPGAQQLYSRGPPAPHIVGSTLGSFQGAASSASHLHTSASQPY
SSFVNHYNSPAMYSASSSVASQGFPSTCGHYAMSTVSNAAYPSVSYPSLPAGDTYGQM
FTSQNAPTVRPVKDNSFSGQNTAISHPSPLPPLPSQQHHQQQSLSGYSTLTWSSPGLP
STQDNLIRNHTGSLAVANNNPTITVADSLSCPVMQNVQPPKSSPVVSTVLSGSSGSSS
TRTPPTANHPVEPVTSVTQPSELLQQKGVDSSSTTSSASPMPNSYDALEGGSYPDMLS
SSASSPAPDPAPEPDPASAPAPASAPAPVVPQPSKMAKPFGYGYPTLQPGYQNATAPL
ISGVQPSNPVYSGFQQYPQYPGVNQLSSSIGGLSLQSSPQPESLRPVNLTQERNILPM
TPVWAPVPNLNADLKKLNCSPDSFRCTLTNIPQTQALLNKAKLPLGLLLHPFRDLTQL
PVITSNTIVRCRSCRTYINPFVSFIDQRRWKCNLCYRVNDVPEEFMYNPLTRSYGEPH
KRPEVQNSTVEFIASSDYMLRPPQPAVYLFVLDVSHNAVEAGYLTILCQSLLENLDKL
PGDSRTRIGFMTFDSTIHFYNLQEGLSQPQMLIVSDIDDVFLPTPDSLLVNLYESKEL
IKDLLNALPNMFTNTRETHSALGPALQAAFKLMSPTGGRVSLFQTQLPSLGAGLLQSR
EDPNQRSSTKVVQHLGPATDFYKKLALDCSGQQTAVDLFLLSSQYSDLASLACMSKYS
AGCIYYYPSFHYTHNPSQAEKLQKDLKRYLTRKIGFEAVMRIRCTKGLSMHTFHGNFF
VRSTDLLSLANINPDAGFAVQLSIEESLTDTSLVCFQTALLYTSSKGERRIRVHTLCL
PVVSSLADVYAGVDVQAAICLLANMAVDRSVSSSLSDARDALVNAVVDSLSAYGSTVS
NLQHSALMAPSSLKLFPLYVLALLKQKAFRTGTSTRLDDRVYAMCQIKSQPLVHLMKM
IHPNLYRIDRLTDEGAVHVNDRIVPQPPLQKLSAEKLTREGAFLMDCGSVFYIWVGKG
CDNNFIEDVLGYTNFASIPQKMTHLPELDTLSSERARSFITWLRDSIPLSPILHIVKD
ESPAKAEFFQHLIEDRTEAAFSYYEFLLHVQQQICK"
BASE COUNT 1017 a 894 c 714 g 1041 t
ORIGIN
1 aagttcggcg gagcggccgt ctcaggagcc gcagcgcccg cgggcccggg tgcgggcccg
61 gcgccgcacc agcagaacgg tccagcccag aatcaaatgc aggttccatc tggatatgga
121 ttgcatcatc aaaactatat tgctccctca ggacattact ctcaaggacc tgggaaaatg
181 acctcattgc cattggatac ccagtgtggt gattactact ctgctctcta tacagtacca
241 acacaaaatg tgactcctaa cacagtgaac cagcaaccag gagcacagca gttgtacagc
301 aggggtcctc ctgcccctca tattgtggga tccactctag gatctttcca aggtgctgca
361 tcgtcagcat cccatttgca tacgagtgcc tcccaaccat actcctcttt tgtgaatcac
421 tacaatagtc cagccatgta ctctgccagc tcttctgttg cgtctcaggg atttccctct
481 acttgtggtc attatgctat gtcaactgtt tctaatgccg cgtatcctag tgtttcatat
541 ccctctctgc ctgctggtga tacatatggg caaatgttta cctcacagaa tgctccgact
601 gttaggccag ttaaagataa ttcattctct ggtcaaaata cagctatcag ccatccatcg
661 ccacttccac ctctaccatc acaacagcac caccagcagc aaagtctttc aggatacagt
721 actctaacgt ggtcatctcc aggccttcca tcgactcaag acaatctcat ccgaaaccac
781 acaggatccc tggctgtagc gaacaacaac ccaaccatta ctgttgcaga ttccttatcc
841 tgtcctgtta tgcaaaatgt tcagcctccc aagtccagcc cagtggtatc cactgtttta
901 tcaggatcct caggatcctc atcaacaaga acacctccca ctgcaaatca cccagttgag
961 cctgtgacct cagttacaca gccatcagag ctattacaac aaaaaggtgt tgacagctct
1021 tctaccacaa gcagtgcttc tccaatgccc aacagttatg atgccctgga aggaggcagt
1081 tacccagata tgctttcttc atcagcaagc agtcctgctc ctgatcccgc ccctgaacct
1141 gatcctgctt ctgctccagc tccagcttca gctccagctc ctgtcgtccc tcagccttca
1201 aaaatggcta agccttttgg ctatggctat ccaacacttc agcctggtta tcagaatgct
1261 acagcaccac ttatttctgg agtacagccc agtaacccgg tatattctgg attccagcag
1321 tatcctcaat atcctggtgt gaaccagcta tcctccagta taggaggatt gagtcttcag
1381 agttctccac aaccagaaag cctgagacct gtaaacctta ctcaggagag gaatatttta
1441 cctatgactc ctgtttgggc tcctgtacct aacttgaatg cagacctcaa aaaattaaac
1501 tgtagcccag attcatttcg gtgtactttg acaaatattc cacagacaca ggctttactg
1561 aataaagcta agcttccttt aggattgttg ttacatccct tcagagacct aacgcaatta
1621 ccagtgataa catcaaatac cattgtgagg tgccgatcct gtcgaacgta tattaacccc
1681 tttgtatcct tcattgatca acgtagatgg aaatgcaatt tgtgctatag agtaaacgat
1741 gttcctgaag aatttatgta taaccccctt acccgatctt atggagagcc tcataaacga
1801 ccagaagttc agaattcaac tgtggagttc attgcttctt cagattacat gctgcgtcct
1861 cctcaacctg cagtttactt gtttgtttta gatgtgtctc ataatgcagt ggaagctgga
1921 tatttgacaa ttttgtgcca gtcactccta gaaaatctag acaagcttcc tggagattca
1981 cgaacaagaa taggattcat gacctttgat agcactattc atttctacaa tttacaagaa
2041 ggattatcac agcctcaaat gttgattgtg tctgatatag atgatgtttt tctacctaca
2101 ccggatagtt tacttgtgaa tctatatgaa agtaaagagc ttataaaaga cttactgaat
2161 gcattaccaa acatgttcac caatacaaga gaaacacaca gtgcccttgg tcctgcactt
2221 caggctgcct ttaaattaat gtctccaaca ggtggccgtg tgtctttatt tcagacacag
2281 ttaccttcct tgggtgcagg acttctgcaa tccagagaag atcctaatca gagatcaagt
2341 acaaaggtgg tacaacatct tggccctgca actgattttt ataagaaact tgcattagat
2401 tgctcgggac agcaaactgc agtggatttg ttccttttaa gttcacagta ttctgatctt
2461 gcttctctag cttgcatgtc caagtattct gcagggtgca tctattatta tccatcattc
2521 cactatactc acaatccttc acaagcagaa aagttacaaa aagacctaaa acggtatctc
2581 acaagaaaaa ttgggtttga agctgttatg agaataaggt gtactaaagg tctttcaatg
2641 cacacttttc acggtaactt ctttgtccgt tctactgatt tgttatccct tgccaacatc
2701 aatcctgatg ctggatttgc ggtgcagttg tcaattgaag aaagtttaac agatacttcc
2761 ttagtatgtt ttcaaacagc cctattatat acatcaagca aaggtgagcg gagaattaga
2821 gtacatacac tttgtttgcc agtggtaagt tcactagcag atgtatatgc gggagtggat
2881 gtacaagctg ccatctgcct tctggcaaac atggctgtgg atcggtccgt ttcatcaagt
2941 ctgtcagatg caagagatgc cttagtgaat gctgtagtgg actcattgtc tgcatatggc
3001 tcaactgtct caaatttaca gcactctgca ttgatggcgc ccagctccct caagttgttt
3061 cctctctatg ttttggccct tctcaaacag aaagcattta gaacgggtac aagcacacgg
3121 ctggatgatc gtgtatatgc catgtgtcag ataaagtctc agccacttgt tcatctaatg
3181 aaaatgattc atcccaactt atacaggata gacagattga cagatgaggg tgcagtacat
3241 gttaatgaca ggattgtacc acagccacct cttcaaaaat tgtctgcaga gaagctgaca
3301 agagaaggtg ctttccttat ggactgtggc tctgtttttt acatttgggt tgggaaaggc
3361 tgtgacaata acttcataga ggatgtgctt ggatatacta attttgcatc aataccacag
3421 aaaatgacac atcttccaga gctagataca ctttcatcag aaagagccag atccttcata
3481 acttggctta gagacagcat accattaagt ccaatccttc acatagtaaa agatgagagt
3541 cctgccaaag cagaattttt tcagcatttg attgaagacc ggacagaggc tgcattttct
3601 tactatgaat ttttgcttca tgttcagcag cagatttgta agtgaagtag aataaaattg
3661 aataag
//