LOCUS AK300273 951 bp mRNA linear HUM 31-JUL-2008
DEFINITION Homo sapiens cDNA FLJ57590 complete cds, highly similar to
Collagen triple helix repeat-containing protein 1 precursor.
ACCESSION AK300273
VERSION AK300273.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 951)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..951
/clone="PLACE7001513"
/clone_lib="PLACE7"
/db_xref="H-InvDB:HIT000494897"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="placenta"
CDS 108..551
/codon_start=1
/note="highly similar to Collagen triple helix
repeat-containing protein 1 precursor"
/protein_id="BAG62033.1"
/transl_table=1
/translation="MRPQGPAASPQRLRGLLLLLLLQLPAPSSASEIPKGKQKAQLRQ
REVVDLYNGMCLQGPAGVPGRDRSPGANGIPGTPGIPGRDGFKGEKGECLRESFEESW
TPNYKQCSWSSLNYGIDLGKIAVSLNYFKIEARFKGFHILVLIFR"
BASE COUNT 266 a 204 c 236 g 245 t
ORIGIN
1 gatgcagcct gcggcggcct cggagcgcgg cggagccaga cgctgaccac gttcctctcc
61 tcggtctcct ccgcctccag ctccgcgctg cccggcagcc gggagccatg cgaccccagg
121 gccccgccgc ctccccgcag cggctccgcg gcctcctgct gctcctgctg ctgcagctgc
181 ccgcgccgtc gagcgcctct gagatcccca aggggaagca aaaggcgcag ctccggcaga
241 gggaggtggt ggacctgtat aatggaatgt gcttacaagg gccagcagga gtgcctggtc
301 gagacaggag ccctggggcc aatggcattc cgggtacacc tgggatccca ggtcgggatg
361 gattcaaagg agaaaagggg gaatgtctga gggaaagctt tgaggagtcc tggacaccca
421 actacaagca gtgttcatgg agttcattga attatggcat agatcttggg aaaattgcgg
481 taagtttgaa ttattttaaa attgaagcaa gatttaaggg ttttcatatt ttagtgttaa
541 tttttaggtg acattttatt tttttttaac taaaagactt agagaagtag gtagcatgtg
601 acttttaatt taaaactaat gaaaaagttt ataacatttc agaatttcat agagatattt
661 ctaagacaaa tgcttatcat tttaaccata gtatctaaaa taacatactt tttaaaaatg
721 caaacaaaag agagcatatg tgtctgtgtt ggacagtaag caactttcca atcttatcct
781 aaagtaaatt taaatttagt ctaagaaatt ctgtcctggc ttcagacata aaggtgggaa
841 aaaatttcca agaaattacc acattgatct ggaagcagaa gtccattggt gtttgtcttt
901 atttaggaag catgcccagc ttaaaactgc taagcctaag agaagtgaaa t
//