LOCUS AK300252 4034 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ61705 complete cds, highly similar to
Symplekin.
ACCESSION AK300252
VERSION AK300252.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4034)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..4034
/clone="PLACE7000497"
/clone_lib="PLACE7"
/db_xref="H-InvDB:HIT000494876"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="placenta"
CDS 100..3924
/codon_start=1
/note="highly similar to Symplekin"
/protein_id="BAH13243.1"
/transl_table=1
/translation="MASGSGDSVTRRSVASQFFTQEEGPGIDGMTTSERVVDLLNQAA
LITNDSKITVLKQVQELIINKDPTLLDNFLDEIIAFQADKSIEVRKFVIGFIEEACKR
DIELLLKLIANLNMLLRDENVNVVKKAILTMTQLYKVALQWMVKSRVISELQEACWDM
VSAMAGDIILLLDSDNDGIRTHAIKFVEGLIVTLSPRMADSEIPRRQEHDISLDRIPR
DHPYIQYNVLWEEGKAALEQLLKFMVHPAISSINLTTALGSLANIARQRPMFMSEVIQ
AYETLHANLPPTLAKSQVSSVRKNLKLHLLSVLKHPASLEFQAQITTLLVDLGTPQAE
IARNMPSSKDTRKRPRDDSDSTLKKMKLEPNLGEDDEDKDLEPGPSGTSKASAQISGQ
SDTDITAEFLQPLLTPDNVANLVLISMVYLPEAMPASFQAIYTPVESAGTEAQIKHLA
RLMATQMTAAGLGPGVEQTKQCKEEPKEEKVVKTESVLIKRRLSAQGQAISVVGSLSS
MSPLEEEAPQAKRRPEPIIPVTQPRLAGAGGRKKIFRLSDVLKPLTDAQVEAMKLGAV
KRILRAEKAVACSGAAQVRIKILASLVTQFNSGLKAEVLSFILEDVRARLDLAFAWLY
QEYNAYLAAGASGSLDKYEDCLIRLLSGLQEKPDQKDGIFTKVVLEAPLITESALEVV
RKYCEDESRTYLGMSTLRDLIFKRPSRQFQYLHVLLDLSSHEKDKVRSQALLFIKRMY
EKEQLREYVEKFALNYLQLLVHPNPPSVLFGADKDTEVAAPWTEETVKQCLYLYLALL
PQNHKLIHELAAVYTEAIADIKRTVLRVIEQPIRGMGMNSPELLPLVENCPKGAETLV
TRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLIPVLNGLEKKEVIQALPKLIKLN
PIVVKEVFNRLLGTQHGEGNSALSPLNPGELLIALHNIDSVKCDMKSIIKATNLCFAE
RNVYTSEVLAVVMQQLMEQSPLPMLLMRTVIQSLTMYPRLGGFVMNILSRLIMKQVWK
YPKVWEGFIKCCQRTKPQSFQVILQLPPQQLGAVFDKCPELREPLLAHVRSFTPHQQA
HIPNSIMTILEASGKQEPEAKEAPAGPLEEDDLEPLTLAPAPAPRPPQDLIGLRLAQE
KALKRQLEEEQKLKPGGVGAPSSSSPSPSPSARPGPPPSEEAMDFREEGPECETPGIF
ISMDDDSGLTEAALLDSSLEGPLPKETAAGGLTLKEERSPQTLAPVGEDAMKTPSPAA
EDAREPEAKGNS"
BASE COUNT 898 a 1231 c 1218 g 687 t
ORIGIN
1 gaacggaaga tggcggcggc ggcggcggcg gagtgtagga agaggcactg ctgagggggc
61 gcgaggggaa cggaggccag agctgcgctg acagcagcca tggcgagcgg cagtggagac
121 agcgtcaccc gtcggagcgt ggcatcacag tttttcactc aagaggaggg gccgggcatc
181 gatggcatga ccacctcaga gagggtggtg gatcttctga accaggcggc gctgatcacc
241 aatgactcaa agatcacagt gctcaaacag gtccaggagc tgatcatcaa caaagacccc
301 acactactgg acaacttcct ggatgagatc atcgcattcc aagcagacaa gtcaatcgaa
361 gtgcgaaaat ttgtcatcgg cttcatcgag gaggcatgca agcgagacat tgagttgctg
421 ctgaaactca ttgcaaacct caacatgctc ttgagggacg agaatgtgaa cgtggtgaag
481 aaggctatcc tcaccatgac ccagctctac aaggtggccc tgcagtggat ggtaaagtca
541 cgggtcatta gcgagctaca ggaggcctgc tgggacatgg tatctgccat ggcgggggac
601 atcatcctgc tattggactc tgacaatgac ggcatccgca cccacgccat caagtttgtg
661 gagggcctca ttgtcaccct gtcaccccgc atggctgact cagagatacc ccgacgccag
721 gagcatgata tcagcctgga ccgcatccct cgtgaccacc cctacatcca gtacaacgtg
781 ctatgggaag agggcaaggc agccttggag cagctgctta agttcatggt gcaccctgcc
841 atctcctcca tcaacctgac cacagcgctg ggctcccttg ccaatatcgc ccgccagaga
901 cccatgttca tgtctgaggt gatccaggcc tatgaaactc tgcatgccaa cctgcccccg
961 acgctggcca aatcgcaggt gagcagtgtg cgtaagaatc tgaagctgca cctgttgagt
1021 gtgctgaagc acccggcttc cttggagttc caggcccaga tcaccaccct gctggtggac
1081 ctgggcacac ctcaggccga gatcgcccgc aacatgccga gcagcaagga cacccgcaag
1141 cggccccgcg atgactcgga ctccacactc aagaagatga agctggagcc caacctgggg
1201 gaggacgatg aggacaaaga cttggagcca ggcccgtcgg ggacctcgaa ggcctcagcg
1261 cagatctccg gccagtcaga cacggacatc acagctgagt tcctgcagcc tctgctgacg
1321 cctgataatg tggctaatct ggtcctcatc agcatggtgt acctacccga ggccatgcca
1381 gcctccttcc aggccatcta cacccccgtg gagtcagcag gcacggaagc ccagatcaag
1441 cacctggctc ggctcatggc cacacagatg acagctgccg gactgggacc aggtgtagag
1501 cagaccaaac agtgcaagga ggagcccaag gaggagaagg tggtgaagac agagagcgtc
1561 ctgatcaagc ggcgcctgtc agcccagggc caagccatct cggtggtggg ttccctgagc
1621 tccatgtccc ccctggagga agaggcaccg caggccaaga ggaggccaga gcccattatc
1681 cctgtcactc agccccggct ggcaggcgct ggtgggcgca agaaaatttt ccgtctcagc
1741 gacgtgctga agccccttac cgatgcccag gtggaagcca tgaagctggg cgctgtgaag
1801 cggatcctgc gggctgagaa ggctgtggcc tgcagcgggg cagcccaggt ccgcataaag
1861 atcctggcca gcctggtgac acagttcaac tcgggcctga aggcggaggt cctgtccttc
1921 atcctggagg atgtgcgggc ccgcctggac ctggccttcg cctggctcta ccaggagtac
1981 aacgcctacc tggccgcagg tgcctcgggc tccctggaca agtatgagga ctgcctcatc
2041 cgcctgttgt ctggcctgca ggagaaacca gaccagaagg atgggatctt caccaaggtt
2101 gtgctggagg cgccactcat cacagagagt gccctggagg tggtccgcaa gtactgcgag
2161 gatgagagtc gcacctatct gggcatgtcc acacttcgag acctgatctt caagcgcccg
2221 tcccgccagt tccagtactt gcatgtcctc ctcgacctca gctcccatga gaaggacaag
2281 gtgcgctccc aggccctgct gttcatcaaa cgcatgtatg agaaggagca gctgcgggag
2341 tatgtggaga aatttgccct caactacctg cagctcctgg tgcaccccaa cccaccgtct
2401 gtgctgtttg gagctgacaa ggacacagag gtggcagcac cctggacgga ggagacagtg
2461 aagcagtgtc tgtacctcta cctggccctc ctgcctcaga accacaagct gatccacgaa
2521 ctggcggccg tgtacactga agccatcgcc gacatcaagc ggacggtgct gagggtcatt
2581 gagcagccga tccgaggaat gggcatgaac tccccggagc tgctcccgct ggtggaaaat
2641 tgtcccaagg gagcagagac actggtcaca agatgtctgc acagcctcac agacaaagtc
2701 ccaccctccc cagagctggt gaagcgggtc cgggatctct accacaagcg actgccagac
2761 gtccgcttcc tcatcccggt gctcaatggg ctggagaaga aagaggtgat ccaggccctg
2821 cctaaactca tcaaactcaa ccccatcgtg gtgaaggaag tcttcaaccg cctgctgggc
2881 acccagcatg gtgagggaaa ctcagccttg tccccgctga accctggaga gctcctgatc
2941 gcattacaca acattgactc cgtgaagtgc gacatgaaat ccatcatcaa agccaccaac
3001 ctgtgctttg cggagcggaa cgtgtacacg tcagaggtgc tggccgtggt gatgcagcag
3061 ctgatggagc agagccccct gcccatgctg ctcatgagga ccgtcatcca gtccctgacc
3121 atgtaccccc gcctgggggg cttcgtcatg aacatcctgt cccgcctcat catgaagcag
3181 gtgtggaagt accccaaggt gtgggagggc ttcatcaagt gctgccagcg cacaaagccc
3241 cagagcttcc aggtcatcct gcagctgccg ccccagcagc tgggagccgt ctttgacaag
3301 tgcccagagc tccgggagcc cctgctggcc catgtccgct ccttcacccc ccaccagcaa
3361 gctcacatcc ctaactccat catgaccatc ttggaggcca gcggcaagca ggagccagag
3421 gccaaggagg cgcctgcggg gcccttggag gaggatgatc tggagcccct gaccttggcg
3481 ccggccccag caccccggcc ccctcaggac ctcatcggcc tgcgactggc ccaggagaag
3541 gccttaaagc ggcagctgga ggaggaacag aagctgaagc cgggaggagt gggagccccc
3601 tcctcttcct ccccctctcc ctctccgtcg gcccggccag gcccgccccc gtctgaggaa
3661 gccatggatt tccgggagga ggggcctgag tgcgagaccc cgggcatctt catcagcatg
3721 gatgacgact cggggctgac cgaggccgcg ctgttggact ctagtctcga gggcccccta
3781 cccaaggaga cggcagcggg cgggctgacc ttgaaggagg agcggagccc ccagaccctc
3841 gcacctgttg gagaagatgc tatgaagact cccagcccgg ctgccgagga cgccagggaa
3901 cccgaggcca aggggaacag ctgacggtgc tcgaggggga aagggggtgg gacagggact
3961 cggggctggg ggacggggcg gggcttgacc tgcgggtgct ttgccttaaa aagaaataaa
4021 agatgtgaac ttgg
//