LOCUS AK300149 1328 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ54150 complete cds, highly similar to
Heterogeneous nuclear ribonucleoprotein D0.
ACCESSION AK300149
VERSION AK300149.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1328)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1328
/clone="PLACE6001832"
/clone_lib="PLACE6"
/db_xref="H-InvDB:HIT000494773"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="placenta"
CDS 307..1218
/codon_start=1
/note="highly similar to Heterogeneous nuclear
ribonucleoprotein D0"
/protein_id="BAG61935.1"
/transl_table=1
/translation="MSEEQFGGDGAAAAATAAASGGTEGGSAESEGAKIDASKNEEDE
GKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV
MDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIE
LPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMSKEQYQQQQQWG
SRGGFAGRARGRGGGPSQNWNQGYSNYWNQGYGNYGYNSQGYGGYGGYDYTGYNNYYG
YGDYSNQQSGYGKVSRRGGHQNSYKPY"
BASE COUNT 377 a 246 c 419 g 286 t
ORIGIN
1 attttaggtg gtccgcggcg gcgccattaa agcgaggagg aggcgagagc ggccgccgct
61 ggtgcttatt cttttttagt gcagcgggag agagcgggag tgtgcgccgc gcgagagtgg
121 gaggcgaagg gggcaggcca gggagaggcg caggagcctt tgcagccacg cgcgcgcctt
181 ccctgtcttg tgtgcttcgc gaggtagagc gggcgcgcgg cagcggcggg gattactttg
241 ctgctagttt cggttcgcgg cagcggcggg tgtagtctcg gcggcagcgg cggagacact
301 agcactatgt cggaggagca gttcggcggg gacggggcgg cggcagcggc aacggcggcc
361 gcgtctggag gcaccgaagg gggcagcgcc gagtcggagg gggcgaagat tgacgccagt
421 aagaacgagg aggatgaagg gaaaatgttt ataggaggcc ttagctggga cactacaaag
481 aaagatctga aggactactt ttccaaattt ggtgaagttg tagactgcac tctgaagtta
541 gatcctatca cagggcgatc aaggggtttt ggctttgtgc tatttaaaga atcggagagt
601 gtagataagg tcatggatca aaaagaacat aaattgaatg ggaaggtgat tgatcctaaa
661 agggccaaag ccatgaaaac aaaagagccg gttaaaaaaa tttttgttgg tggcctttct
721 ccagatacac ctgaagagaa aataagggag tactttggtg gttttggtga ggtggaatcc
781 atagagctcc ccatggacaa caagaccaat aagaggcgtg ggttctgctt tattaccttt
841 aaggaagaag aaccagtgaa gaagataatg gaaaagaaat accacaatgt tggtcttagt
901 aaatgtgaaa taaaagtagc catgtcgaag gaacaatatc agcaacagca acagtgggga
961 tctagaggag gatttgcagg aagagctcgt ggaagaggtg gtggccccag tcaaaactgg
1021 aaccagggat atagtaacta ttggaatcaa ggctatggca actatggata taacagccaa
1081 ggttacggtg gttatggagg atatgactac actggttaca acaactacta tggatatggt
1141 gattatagca accagcagag tggttatggg aaggtatcca ggcgaggtgg tcatcaaaat
1201 agctacaaac catactaaat tattccattt gcaacttatc cccaacaggt ggtgaagcag
1261 tattttccaa tttgaagatt catttgaagg tggctcctgc cacctgctaa tagcagttca
1321 aactaaat
//