LOCUS AK300142 1586 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ56550 complete cds, highly similar to Fork
head domain transcription factor AFX1.
ACCESSION AK300142
VERSION AK300142.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1586)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1586
/clone="PLACE6001167"
/clone_lib="PLACE6"
/db_xref="H-InvDB:HIT000494766"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="placenta"
CDS 327..1523
/codon_start=1
/note="highly similar to Fork head domain transcription
factor AFX1"
/protein_id="BAG61928.1"
/transl_table=1
/translation="MDPGNENSATEAAAIIDLDPDFEPQSRPRSCTWPLPRPEIANQP
SEPPEVEPDLGEKVHTEGRSEPILLPSRLPEPAGGPQPGILGAVTGPRKGGSRRNAWG
NQSYAELISQAIESAPEKRLTLAQIYEWMVRTVPYFKDKGDSNSSAGWKNSIRHNLSL
HSKFIKVHNEATGKSSWWMLNPEGGKSGKAPRRRAASMDSSSKLLRGRSKAPKKKPSV
LPAPPEGATPTSPVGHFAKWSGSPCSRNREEADMWTTFRPRSSSNASSVSTRLSPLRP
ESEVLAEEIPASVSSYAGGVPPTLNEGLELLDGLNLTSSHSLLSRSGLSGFSLQHPGV
TGPLHTYSSSLFSPAEGPLSAGEGCFSSSQALEALLTSDTPPPPAVGSHHFLCQRLAY
PDCIMC"
BASE COUNT 358 a 473 c 458 g 297 t
ORIGIN
1 atgaggggat acagtgcctc aggtttaaaa gagcaggaag ctgagtgaga ggttgcagaa
61 aaagtgtctt cgctcggcag aggttacagg tggcatctca gaaagagctt tgaggctaca
121 ggctgtagtc gggaagggga tcggagaact gtgtgaaggg acagcttagg gactagcgtc
181 ctgggactag ggggaagttc gcgactttct gaagactggc aggaatgtgc ctcctggccc
241 tcgatgcttc ccccctgagg ggaggcatcg tgagggactg tggcaggctt cactgaacgc
301 tgagccgggg aggtccaact ccacgtatgg atccggggaa tgagaattca gccacagagg
361 ctgccgcgat catagaccta gatcccgact tcgaacccca gagccgtccc cgctcctgca
421 cctggcccct tccccgacca gagatcgcta accagccgtc cgagccgccc gaggtggagc
481 cagatctggg ggaaaaggta cacacggagg ggcgctcaga gccgatcctg ttgccctctc
541 ggctcccaga gccggccggg ggcccccagc ccggaatcct gggggctgta acaggtcctc
601 ggaagggagg ctcccgccgg aatgcctggg gaaatcagtc atatgcagaa ctcatcagcc
661 aggccattga aagcgccccg gagaagcgac tgacacttgc ccagatctac gagtggatgg
721 tccgtactgt accctacttc aaggacaagg gtgacagcaa cagctcagca ggatggaaga
781 actcgatccg ccacaacctg tccctgcaca gcaagttcat caaggttcac aacgaggcca
841 ccggcaaaag ctcttggtgg atgctgaacc ctgagggagg caagagcggc aaagcccccc
901 gccgccgggc cgcctccatg gatagcagca gcaagctgct ccggggccgc agtaaagccc
961 ccaagaagaa accatctgtg ctgccagctc cacccgaagg tgccactcca acgagccctg
1021 tcggccactt tgccaagtgg tcaggcagcc cttgctctcg aaaccgtgaa gaagccgata
1081 tgtggaccac cttccgtcca cgaagcagtt caaatgccag cagtgtcagc acccggctgt
1141 cccccttgag gccagagtct gaggtgctgg cggaggaaat accagcttca gtcagcagtt
1201 atgcaggggg tgtccctccc accctcaatg aaggtctaga gctgttagat gggctcaatc
1261 tcacctcttc ccattccctg ctatctcgga gtggtctctc tggcttctct ttgcagcatc
1321 ctggggttac cggcccctta cacacctaca gcagctccct tttcagccca gcagaggggc
1381 ccctgtcagc aggagaaggg tgcttctcca gctcccaggc tctggaggcc ctgctcacct
1441 ctgatacgcc accaccccct gctgtgggtt cccatcattt cctgtgtcag cgcctggcct
1501 acccagattg tatcatgtgc tagattggag tggggaagtg tgtcaaatca ataaatgaat
1561 aaattcaata aatgcctata accagc
//