LOCUS AK300111 1572 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ53652 complete cds, highly similar to
Mitochondrial 28S ribosomal protein S27.
ACCESSION AK300111
VERSION AK300111.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1572)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1572
/clone="PERIC2009593"
/clone_lib="PERIC2"
/db_xref="H-InvDB:HIT000494735"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="pericardium"
CDS 171..1247
/codon_start=1
/note="highly similar to Mitochondrial 28S ribosomal
protein S27"
/protein_id="BAG61906.1"
/transl_table=1
/translation="MDKTFERKLPVSPLTISRLIDNISSREEIDHAEYYLYKFRHSPN
CWYLRNWTIHTWIRQCLKYDAQDKALYTLVNKVQYGIFPDNFTFNLLMDSFIKKENYK
DALSVVFEVMMQEAFEVPSTQLLSLYVLFHCLAKKTDFSWEEERNFGASLLLPGLKQK
NSVGFSSQLYGYALLGKVELQQGLRAVYHNMPLIWKPGYLDRALQVMEKVAASPEDIK
LCREALDVLGAVLKALTSADGASEEQSQNDEDNQGSEKLVEQLDIEETEQSKLPQYLE
RFKALHSKLQALGKIESEGLLSLTTQLVKEKLSTCEAEDIATYEQNLQQWHLNLVQLI
QREQQQREQAKQEYQAQKAAKASA"
BASE COUNT 452 a 363 c 378 g 379 t
ORIGIN
1 aacccgttgg ctgttccttt tggtacgctc caagatggct gcctccatag tgcggcgcgg
61 gatgctcctg gcgcggtaaa agatacctgc tttcttcagc ctatgtagac agccacaaat
121 gggaagcaag agaaaaagaa cattactgtc ttgctgatct tgcatcttta atggataaaa
181 catttgagag aaagttgcct gttagtcctt taacaatatc acggcttata gacaacattt
241 cctctcggga agagatagat catgcagagt attaccttta caagtttcga cacagcccca
301 actgctggta tctgagaaac tggactatcc acacctggat taggcagtgt ctaaaatatg
361 atgcacaaga caaagcccta tatacccttg taaataaggt tcaatatgga atttttccag
421 ataactttac attcaattta ctgatggatt ctttcataaa gaaagaaaat tacaaagatg
481 ctttatctgt ggtttttgag gtcatgatgc aagaagcctt tgaagtgcct tccacccaac
541 ttctctccct ctatgtttta tttcattgcc tggcaaagaa gacagacttc agttgggaag
601 aggagaggaa ctttggtgca tcccttttgc ttccaggcct aaaacaaaag aactcagtgg
661 gtttcagttc ccagttgtat ggctatgcac ttcttgggaa ggtggagttg cagcaagggc
721 tacgggctgt gtaccacaac atgcctctga tatggaaacc aggctacctt gacagagccc
781 ttcaagtgat ggagaaagtg gctgcctccc cagaagacat aaagctgtgt agagaagcgc
841 tcgatgtgct gggtgcagtg ctgaaggctc tgacttcagc tgatggggct tcagaggagc
901 agtcccaaaa tgatgaagac aaccaggggt cagaaaaact ggtggagcag ttagacatcg
961 aggaaacaga gcagtccaag cttcctcaat acctggaacg atttaaggcc ttacattcta
1021 agcttcaagc tctgggcaaa attgagtcag aaggtctttt aagtctgacc acccagcttg
1081 tcaaggaaaa actctccacc tgtgaagcag aggacatcgc cacctatgag cagaatctgc
1141 agcagtggca tctaaacctt gtacagttga tccagagaga acagcaacag agggagcaag
1201 cgaagcagga gtaccaggct cagaaagcag caaaggcatc tgcctaatag ggtcccccag
1261 ggccccacct gtctcacaag aacttcactc aaccccgtgc caggactcag cagtggcctg
1321 gacaacagcc tcagcttcct ctacccatct tcttttctta aagcaggcta tgtgccctac
1381 atggcaaggc accatgactg cccatcgaga tgccaagaag ggctatggaa ctatgcaggt
1441 ggctagtggt cagactgaag tcaccagctg aataccttaa ggaggactct tgaggctcat
1501 aatggagttc ctggggcaca gggattagtt atgagcatta aagttcctaa gacccagtga
1561 cagtactggg ag
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