LOCUS AK300059 1561 bp mRNA linear HUM 24-JUL-2008 DEFINITION Homo sapiens cDNA FLJ50660 complete cds, highly similar to Squalene synthetase (EC 2.5.1.21). ACCESSION AK300059 VERSION AK300059.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1561) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..1561 /clone="PERIC2000144" /clone_lib="PERIC2" /db_xref="H-InvDB:HIT000494683" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="pericardium" CDS 296..1294 /codon_start=1 /note="highly similar to Squalene synthetase (EC 2.5.1.21)" /protein_id="BAG61868.1" /transl_table=1 /translation="MTISVEKKVPLLHNFHSFLYQPDWRFMESKEKDRQVLEDFPTIS LEFRNLAEKYQTVIADICRRMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLSRLF SASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQGGREFWPQEVWSRYVKKLGD FAKPENIDLAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLAAC YNNQQVFKGAVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPDSDPSSSKTRQ IISTIRTQNLPNCQLISRSHYSPIYLSFVMLLAALSWQYLTTLSQVTEDYVQTGEH" BASE COUNT 409 a 355 c 358 g 439 t ORIGIN 1 gtgcacatta cacccatgaa cttagaccag ttgcctttat gtatgatcgt atttatactg 61 agaagttact gtgttttttg actttctttt ctatttgcta catattagtt cggtctaaac 121 gtttggtctt ctggtctcca tagttctaca ttggttaaat gcaactcact tctgggagta 181 gtggtgacat tcaactagta ggctttttaa taaactacag aagttcatta ctctcatcaa 241 cgcagtgtgc atattttatc tggttctccg agctctggac acactggaag atgacatgac 301 catcagtgtg gaaaagaagg tcccgctgtt acacaacttt cactctttcc tttaccaacc 361 agactggcgg ttcatggaga gcaaggagaa ggatcgccag gtgctggagg acttcccaac 421 gatctccctt gagtttagaa atctggctga gaaataccaa acagtgattg ccgacatttg 481 ccggagaatg ggcattggga tggcagagtt tttggataag catgtgacct ctgaacagga 541 gtgggacaag tactgccact atgttgctgg gctggtcgga attggccttt cccgtctttt 601 ctcagcctca gagtttgaag accccttagt tggtgaagat acagaacgtg ccaactctat 661 gggcctgttt ctgcagaaaa caaacatcat ccgtgactat ctggaagacc agcaaggagg 721 aagagagttc tggcctcaag aggtttggag caggtatgtt aagaagttag gggattttgc 781 taagccggag aatattgact tggccgtgca gtgcctgaat gaacttataa ccaatgcact 841 gcaccacatc ccagatgtca tcacctacct ttcgagactc agaaaccaga gtgtgtttaa 901 cttctgtgct attccacagg tgatggccat tgccactttg gctgcctgtt ataataacca 961 gcaggtgttc aaaggggcag tgaagattcg gaaagggcaa gcagtgaccc tcatgatgga 1021 tgccaccaat atgccagctg tcaaagccat catatatcag tatatggaag agatttatca 1081 tagaatcccc gactcagacc catcttctag caaaacaagg cagatcatct ccaccatccg 1141 gacgcagaat cttcccaact gtcagctgat ttcccgaagc cactactccc ccatctacct 1201 gtcgtttgtc atgcttttgg ctgccctgag ctggcagtac ctgaccactc tctcccaggt 1261 aacagaagac tatgttcaga ctggagaaca ctgatcccaa atttgtccat agctgaagtc 1321 caccataaag tggatttact ttttttcttt aaggatggat gttgtgttct ctttattttt 1381 ttcctactac tttaatccct aaaagaacgc tgtgtggctg ggacctttag gaaagtgaaa 1441 tgcaggtgag aagaacctaa acatgaaagg aaagggtgcc tcatcccagc aacctgtcct 1501 tgtgggtgat gatcactgtg ctgcttgcgg ctcatggcag agcattcagt gccacggttt 1561 a //