LOCUS AK300038 1949 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ54545 complete cds, highly similar to
Transcription factor 4.
ACCESSION AK300038
VERSION AK300038.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1949)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1949
/cell_type="peripheral blood mononuclear cells
(HPBMC5939)"
/clone="PEBLM2007055"
/clone_lib="PEBLM2"
/db_xref="H-InvDB:HIT000494662"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="primary culture, peripheral blood mononuclear
cells"
/organism="Homo sapiens"
CDS 68..1603
/codon_start=1
/note="highly similar to Transcription factor 4"
/protein_id="BAG61849.1"
/transl_table=1
/translation="MYCAYTIPGMGGNSLMYYYNGKAVYAPSASTADYNRDSPGYPSS
KPATSTFPSSFFMQDGHHSSDPWSSSSGMNQPGYAGMLGNSSHIPQSSSYCSLHPHER
LSYPSHSSADINSSLPPMSTFHRSGTNHYSTSSCTPPANGTDSIMANRGSGAAGSSQT
GDALGKALASIYSPDHTNNSFSSNPSTPVGSPPSLSAGTAVWSRNGGQASSSPNYEGP
LHSLQSRIEDRLERLDDAIHVLRNHAVGPSTAMPGGHGDMHGIIGPSHNGAMGGLGSG
YGTGLLSANRHSLMVGTHREDGVALRGSHSLLPNQVPVPQLPVQSATSPDLNPPQDPY
RGMPPGLQGQSVSSGSSEIKSDDEGDENLQDTKSSEDKKLDDDKKDIKSITRSRSSNN
DDEDLTPEQKAEREKERRMANNARERLRVRDINEAFKELGRMVQLHLKSDKPQTKLLI
LHQAVAVILSLEQQVRERNLNPKAACLKRREEEKVSSEPPPLSLAGPHPGMGDASNHM
GQM"
BASE COUNT 552 a 517 c 455 g 425 t
ORIGIN
1 aaagggacag cgagtttgaa ataaaagttg ttagagtggt actgaggaga aaaaagaatc
61 cgagaccatg tactgcgcat acacaatccc gggcatgggc ggcaactctt tgatgtacta
121 ctataatggg aaagcggtct atgctccatc agcaagcact gccgactaca atagggactc
181 gccaggctat ccttcctcca aaccagcaac cagcactttc cctagctcct tcttcatgca
241 agatggccat cacagcagtg acccttggag ctcctccagt gggatgaatc agcctggcta
301 tgcaggaatg ttgggcaact cttctcatat tccacagtcc agcagctact gtagcctgca
361 tccacatgaa cgtttgagct atccatcaca ctcctcagca gacatcaatt ccagtcttcc
421 tccgatgtcc actttccatc gtagtggtac aaaccattac agcacctctt cctgtacgcc
481 tcctgccaac gggacagaca gtataatggc aaatagagga agcggggcag ccggcagctc
541 ccagactgga gatgctctgg ggaaagcact tgcttcgatc tattctccag atcacactaa
601 caacagcttt tcatcaaacc cttcaactcc tgttggctct cctccatctc tctcagcagg
661 cacagctgtt tggtctagaa atggaggaca ggcctcatcg tctcctaatt atgaaggacc
721 cttacactct ttgcaaagcc gaattgaaga tcgtttagaa agactggatg atgctattca
781 tgttctccgg aaccatgcag tgggcccatc cacagctatg cctggtggtc atggggacat
841 gcatggaatc attggacctt ctcataatgg agccatgggt ggtctgggct cagggtatgg
901 aaccggcctt ctttcagcca acagacattc actcatggtg gggacccatc gtgaagatgg
961 cgtggccctg agaggcagcc attctcttct gccaaaccag gttccggttc cacagcttcc
1021 tgtccagtct gcgacttccc ctgacctgaa cccaccccag gacccttaca gaggcatgcc
1081 accaggacta caggggcaga gtgtctcctc tggcagctct gagatcaaat ccgatgacga
1141 gggtgatgag aacctgcaag acacgaaatc ttcggaggac aagaaattag atgacgacaa
1201 gaaggatatc aaatcaatta ctaggtcaag atctagcaat aatgacgatg aggacctgac
1261 accagagcag aaggcagagc gtgagaagga gcggaggatg gccaacaatg cccgagagcg
1321 tctgcgggtc cgtgacatca acgaggcttt caaagagctc ggccgcatgg tgcagctcca
1381 cctcaagagt gacaagcccc agaccaagct cctgatcctc caccaggcgg tggccgtcat
1441 cctcagtctg gagcagcaag tccgagaaag gaatctgaat ccgaaagctg cgtgtctgaa
1501 aagaagggag gaagagaagg tgtcctcaga gcctccccct ctctccttgg ccggcccaca
1561 ccctggaatg ggagacgcat cgaatcacat gggacagatg taaaagggtc caagttgcca
1621 cattgcttca ttaaaacaag agaccacttc cttaacagct gtattatctt aaacccacat
1681 aaacacttct ccttaacccc catttttgta atataagaca agtctgagta gttatgaatc
1741 gcagacgcaa gaggtttcag cattcccaat tatcaaaaaa cagaaaaaca aaaaaaagaa
1801 agaaaaaagt gcaacttgag ggacgacttt ctttaacata tcattcagaa tgtgcaaagc
1861 agtatgtaca ggctgagaca cagcccagag actgaacggc aatctttcca cactgtggaa
1921 caatgcattt gtgcctaaac ttcttttgg
//