LOCUS AK299976 2303 bp mRNA linear HUM 31-JUL-2008
DEFINITION Homo sapiens cDNA FLJ60872 complete cds, moderately similar to
Signal transducer and activator of transcription 4.
ACCESSION AK299976
VERSION AK299976.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2303)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2303
/cell_type="peripheral blood mononuclear cells
(HPBMC5939)"
/clone="PEBLM2001049"
/clone_lib="PEBLM2"
/db_xref="H-InvDB:HIT000494600"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="primary culture, peripheral blood mononuclear
cells"
/organism="Homo sapiens"
CDS 37..2043
/codon_start=1
/note="moderately similar to Signal transducer and
activator of transcription 4"
/protein_id="BAG61799.1"
/transl_table=1
/translation="MSQWNQVQQLEIKFLEQVDQFYDDNFPMEIRHLLAQWIENQDWE
AASNNETMATILLQNLLIQLDEQLGRVSKEKNLLLIHNLKRIRKVLQGKFHGNPMHVA
VVISNCLREERRILAAANMPVQGPLEKSLQSSSVSERQRNVEHKVAAIKNSVQMTEQD
TKYLEDLQDEFDYRYKTIQTMDQSDKNSAMVNQEVLTLQEMLNSLDFKRKEALSKMTQ
IIHETDLLMNTMLIEELQDWKRRQQIACIGGPLHNGLDQLQNCFTLLAESLFQLRRQL
EKLEEQSTKMTYEGDPIPMQRTHMLERVTFLIYNLFKNSFVVERHLQPKEMKSSAGGK
GNEGCHMVTEELHSITFETQICLYGLTIDLETSSLPVVMISNVSQLPNAWASIIWYNV
STNDSQNLVFFNNPPPATLSQLLEVMSWQFSSYVGRGLNSDQLHMLAEKLTVQSSYSD
GHLTWAKFCKEHLPGKSFTFWTWLEAILDLIKKHILPLWIDGYVMGFVSKEKERLLLK
DKMPGTFLLRFSESHLGGITFTWVDHSESGEVRFHSVEPYNKGRLSALPFADILRDYK
VIMAENIPENPLKYLYPDIPKDKAFGKHYSSQPCEVSRPTERGDKGYVPSVFIPISTI
RSDSTEPHSPSDLLPMSPSVYAVLRENLSPTTIETAMKSPYSAE"
BASE COUNT 725 a 492 c 494 g 592 t
ORIGIN
1 agcactgcct gggacctgtg ctgagagagc gctagcatgt ctcagtggaa tcaagtccaa
61 cagttagaaa tcaagttttt ggagcaggtg gatcaattct atgatgacaa ctttcccatg
121 gaaattcggc atctgttggc ccaatggatt gaaaatcaag actgggaggc agcttctaac
181 aatgaaacca tggcaacgat tcttcttcaa aacttgttaa tacaactgga tgaacagtta
241 ggtcgtgttt ccaaagagaa aaacctactc ttgatacaca atctaaaaag aattaggaag
301 gtccttcagg gaaaatttca tggaaatcca atgcatgtag ctgtggttat ttcaaactgt
361 ttaagggaag agaggagaat attggctgca gccaacatgc ctgtccaggg gcctctagag
421 aaatccttac aaagttcttc agtttcagaa agacagagga atgtggagca caaagtggct
481 gccattaaaa acagtgtgca gatgacagaa caagatacca aatacttaga agatctgcaa
541 gacgaatttg actacaggta taaaacaatt cagacaatgg atcagagtga caagaatagt
601 gccatggtga atcaggaagt tttgacactg caggaaatgc ttaacagcct cgatttcaag
661 agaaaggagg ctctcagtaa aatgacccaa atcatccatg agacagacct gttaatgaac
721 accatgctca tagaagagct gcaagactgg aagcggcggc agcaaatcgc ctgcatcggg
781 ggtccactcc acaatgggct cgaccagctt cagaactgct ttacactatt ggcagaaagt
841 cttttccaac tgagaaggca attggagaaa ctagaggagc aatctaccaa aatgacatat
901 gaaggtgatc ccattccaat gcaaagaact cacatgctag aaagagtcac cttcttgatc
961 tacaaccttt tcaagaactc atttgtggtt gagcgacatt tgcaaccaaa ggaaatgaag
1021 tccagtgctg gaggtaaagg aaatgagggc tgtcacatgg tgactgaaga acttcattcc
1081 ataacgtttg aaacacagat ctgcctctat ggcctgacca tagatttgga gaccagctca
1141 ttgcctgtgg tgatgatttc caatgtcagt cagttaccta atgcttgggc atccatcatt
1201 tggtacaacg tgtcaaccaa cgattcccag aacttggttt tctttaataa tcctccacct
1261 gccacattga gtcaactact ggaggtgatg agctggcagt tttcatcgta cgttggtcgt
1321 ggtcttaact cagatcaact ccatatgctg gcagagaagc ttacagtcca atctagctac
1381 agtgatggtc acctcacctg ggccaagttc tgcaaggaac atttacctgg taaatcattt
1441 accttttgga catggcttga agcaatattg gatctaatta agaaacacat tcttcccctt
1501 tggattgatg ggtatgtcat gggctttgtt agcaaagaga aggaacggct gttgctaaag
1561 gataaaatgc ctggcacctt tttattaaga ttcagtgaaa gccatctcgg aggaataact
1621 ttcacctggg tggaccattc tgaaagtggg gaagtgagat tccactctgt agaaccctac
1681 aataaaggcc ggttgtctgc tctgccattc gctgacatcc tgcgagacta caaagttatt
1741 atggctgaaa acattcctga aaaccctctg aagtacctat atcctgacat tcccaaagac
1801 aaagccttcg gtaaacacta cagctctcag ccttgcgaag tttcaagacc aacagaaagg
1861 ggtgacaaag gttatgttcc ttctgttttt atccccatct caacaatccg aagtgattca
1921 acagagccac attctccatc agaccttctt cccatgtctc caagtgtgta tgcggtgttg
1981 agagaaaacc tgagtcccac aacaattgaa actgcaatga agtctcctta ttctgctgaa
2041 tgacaggata aactctgacg caccaagaaa ggaagcaaat gaaaaagttt aaagactgtt
2101 ctttgcccaa taaccacatt ttatttcttc agctttgtaa ataccaggtt ctaggaaatg
2161 tttgacatct gaagctctct tcacactccc gtggcactcc tcaattggga gtgttgtgac
2221 tgaaatgctt gaaaccaaag cttcagataa acttgcaaga taagacaact ttaagaaacc
2281 agtgttaata acaatattaa cag
//