LOCUS AK299941 2322 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ55642 complete cds, moderately similar to Mus
musculus SH3-domain GRB2-like (endophilin) interacting protein 1
(Sgip1), mRNA.
ACCESSION AK299941
VERSION AK299941.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2322)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2322
/clone="OCBBF3027668"
/clone_lib="OCBBF3"
/db_xref="H-InvDB:HIT000494565"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 237..2150
/codon_start=1
/note="moderately similar to Mus musculus SH3-domain
GRB2-like (endophilin) interacting protein 1 (Sgip1),
mRNA"
/protein_id="BAH13177.1"
/transl_table=1
/translation="MMEGLKKRTRKAFGIRKKEKDTDSTGSPDRDGIKKSNGAPNGFY
AEIDWERYNSPELDEEGYSIRPEEPGSTKGKHFYSSSESEEEEESHKKFNIKIKPLQS
KDILKNAATVDELKASIGNIALSPSPVRKSPRRSPGAIKRNLSSEEVARPRRSTPTPE
LISKKPPDDTTALAPLFGPPLESAFDEQKTEVLLDQPEIWGSGQPINPSMESPKLTRP
FPTGTPPPLPPKNVPATPPRTGSPLTIGPGASSPARPATPLVPCRSTTPPPPPPRPPS
RPKLPPGKPGVGDVSRPFSPPIHSSSPPPIAPLARAESTSSISSTNSLSAATTPTVEN
EQPSLVWFDRGKFYLTFEGSSRGPSPLTMGAQDTLPVAAAFTETVNAYFKGADPSKCI
VKITGEMVLSFPAGITRHFANNPSPAALTFRVINFSRLEHVLPNPQLLCCDNTQNDAN
TKEFWVNMPNLMTHLKKVSEQKPQATYYNVDMLKYQVSAQGIQSTPLNLAVNWRCEPS
STDLRIDYKYNTDAMTTAVALNNVQFLVPIDGGVTKLQAVLPPAVWNAEQQRILWKIP
DISQKSENGGVGSLLARFQLSEGPSKPSPLVVQFTSEGSTLSGCDIELVGAGYRFSLI
KKRFAAGKYLADN"
BASE COUNT 683 a 583 c 495 g 561 t
ORIGIN
1 agcttgccgt tcctctccct ttctctcagc atcttcttgg tagcctgcct gtaggtgaag
61 aagcaccagc agcatccatg gcctgtcttt tggcttaaca cttatctcct ttggctttga
121 cagcggacgg aatagacctc agcagcggcg tggtgaggac ttagctggga cctggaatcg
181 tatcctcctg tgttttttca gactccttgg aaattaagga atgcaattct gccaccatga
241 tggaaggatt gaaaaaacgt acaaggaagg cctttggaat acggaagaaa gaaaaggaca
301 ctgattctac aggttcacca gatagagatg gaattaagaa aagcaatggg gcaccaaatg
361 gattttatgc ggaaattgat tgggaaagat ataactcacc tgagctggat gaagaaggct
421 acagcatcag acccgaggaa cccggctcta ccaaaggaaa gcacttttat tcttcaagtg
481 aatcggaaga agaagaagaa tcacataaga aatttaatat caagattaaa ccattgcaat
541 ctaaagacat tcttaagaat gctgcaactg tagatgaatt gaaggcatca ataggcaaca
601 tcgcactttc cccatcacca gtgaggaaaa gtccgaggcg cagcccgggt gcaattaaaa
661 ggaacttatc cagtgaagaa gtggcaagac ccaggcgttc cacaccaact ccagaactta
721 taagcaaaaa gcctccagat gacactacgg cccttgctcc tctctttggc ccaccactag
781 aatcagcttt tgatgaacag aagacagaag ttcttttaga tcagcctgag atatggggtt
841 caggccaacc aattaatcca agcatggagt cgccaaagtt aacaaggcct tttcccactg
901 gaacacctcc accactgcct ccaaaaaatg taccagctac cccaccccga acaggatccc
961 ccttaacaat tggaccaggt gcatcatccc ctgctcgacc agccactcct ttggttcctt
1021 gcagaagtac cactccacct ccacctcctc cccggcctcc atcccggcca aagctacctc
1081 caggaaaacc tggagttgga gatgtgtcca gaccttttag ccctcccatt cattcttcca
1141 gccctcctcc aatagcaccc ttagcgcggg ctgaaagcac ttcttcaata tcgtcaacca
1201 attccttgag cgcagccacc actcccacag ttgagaatga acagccttcc ctcgtttggt
1261 ttgacagagg aaagttttat ttgacttttg aaggttcttc caggggaccc agccccctaa
1321 ccatgggagc tcaggacact ctccctgttg cagcagcatt tacagaaaca gtcaatgcct
1381 atttcaaagg agcagaccca agcaaatgta tcgttaagat taccggagaa atggtgttgt
1441 catttcctgc tggcatcacc agacactttg ccaacaaccc gtccccagct gctctgactt
1501 ttcgggtgat aaatttcagc aggttagaac acgtcctgcc aaacccccaa cttctctgct
1561 gtgataatac acaaaatgat gccaatacca aggaattctg ggtaaacatg ccaaatttga
1621 tgactcacct aaagaaagtg tctgaacaaa aaccccaggc tacatattat aacgttgaca
1681 tgctcaaata tcaggtgtct gcccagggca ttcagtccac acctctgaac ctggcagtga
1741 attggcgatg tgagccttca agcactgacc tgcgcataga ttacaaatat aatacagatg
1801 caatgacgac tgctgtggcc ctcaacaatg tgcagttcct ggtccccatc gacggaggag
1861 tcaccaagct ccaggcagtg ctcccaccag cagtctggaa tgctgaacaa cagagaatat
1921 tgtggaagat tcctgatatc tctcagaagt cagaaaatgg aggggtgggt tctttgttgg
1981 caagatttca gttatctgaa ggcccaagca aaccttctcc attggttgtg cagttcacaa
2041 gtgaaggaag caccctttct ggctgtgaca ttgaacttgt tggagcaggg tatcgatttt
2101 cactcatcaa gaaaaggttt gctgcaggaa aatacttggc agataactaa tgaaatctta
2161 tgcaaggatt tggaggattc atataatgga gaactgatgt atgagaaaca gattttaatt
2221 ttggtttgat gaaaacaaac caatatctgc acttgggata tatcaggtgg aaagtcaatg
2281 actttcatct gtgatttccc tcacacacta ccatgatgac ca
//