LOCUS AK299938 3650 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ56632 complete cds, moderately similar to
Target of Nesh-SH3 precursor.
ACCESSION AK299938
VERSION AK299938.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3650)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3650
/clone="OCBBF3027253"
/clone_lib="OCBBF3"
/db_xref="H-InvDB:HIT000494562"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 306..3395
/codon_start=1
/note="moderately similar to Target of Nesh-SH3 precursor"
/protein_id="BAG61771.1"
/transl_table=1
/translation="MPPTKSVSEPVPFETEAPSMTIVPTTDIEPVTVRTEATVTTLAP
KTSQRTRTRRPRPKHKTTPRPETLQTKLDFGPITPGTSSAPTTTTKRTRRPHPKPKTT
PHPEVPQTKLVPATILEPVLRTEASGTTAVPATIFEPVSPIKEAPGTTFVPVTDLEPV
TFRTEIPATTLATKTSKRTRPPRPRPKTTPSPQAPETKPVPATVLEPVTLRPEASTTL
ASKTSQRTRRPRLRTKTTPRPEAPESKPVPTAELKPVTLRTETWVTTQAPKTSQRTRR
PRPKTKTTPSPEVPQTKLVPSTDLEPGTLRTEAPKTMVVTTVLEPDTFRTKFPETTLA
PKTQRTRRPRPRPKTTSSPEVPQNKSVSVTGFEPVVHSTDAPGTTFALTELQTLILKP
VTSPSLEMTESQPVSDVLESVTLSTESPKETIAPAKTDYVYPTAKAPLWPEEPKTEVV
ESITYVSEPPETTLETSPLPSQSITLPSPDEPQTEPAPKQTPRAPPKPKTSPRPRIPQ
TQPVPKVPQRVTAKPKTSPSPEVSYTTPAPKDVLLPHKPYPEVSQSEPAPLETRGIPF
IPMISPSPSQEELQTTLEETDQSTQEPFTTKIPRTTELAKTTQAPHRFYTTVRPRTSD
KPHIRPGVKQAPRPSGADRNVSVDSTHPTKKPGTRRPPLPPRPTHPRRKPLPPNNVTG
KPGSAGIISSGPITTPPLRSTPRPTGTPLERIETDIKQPTVPASGEELENITDFSSSP
TRETDPLGKPRFKGPHVRYIQKPDNSPCSITDSVKRFPKEEATEGNATSPPQNPPTNL
TVVTVEGCPSFVILDWEKPLNDTVTEYEVISRENGSFSGKNKSIQMTNQTFSTVENLK
PNTSYEFQVKPKNPLGEGPVSNTVAFSTESADPRVSEPVSAGRDAIWTERPFNSDSYS
ECKGKQYVKRTWYKKFVGVQLCNSLRYKIYLSDSLTGKFYNIGDQRGHGEDHCQFVDS
FLDGRTGQQLTSDQLPIKEGYFRAVRQEPVQFGEIGGHTQINYVQWYECGTTIPGKW"
BASE COUNT 1203 a 1039 c 642 g 766 t
ORIGIN
1 ttatttctct gaaacctaaa atccctctca gcccagaagt gacacacacc aaacctgccc
61 cagaacctca gactctactg ccatcacagt caacaatagg acctgaaaca ccaggaacca
121 aaccttcaac aacattagct ctggaacctg ccacgataca accggagccc ttggtgccca
181 cagctgcctc aaaaccatct gagagaccta aaaccacaca cagaccagat gcacctcaaa
241 ttcagcctgg ttcaaaacca ccaaaacaat tacttcctaa accccaaacc acagcagaac
301 cagacatgcc accaactaaa tccgtctctg agcctgttcc atttgaaact gaagctccct
361 caatgaccat agttcccacc acagacattg agcctgtaac tgtgagaact gaggctacag
421 tgacaacatt agctccaaaa acatcgcaac gaacaagaac acgtcgtcca cgtcccaaac
481 ataaaaccac gccacgccca gagacactgc agaccaaact agactttgga cctattactc
541 ctgggacatc ttcagctcca acaacaacaa caaaaagaac ccgtcgtcca catcccaaac
601 ctaaaaccac gccccatcca gaagtacctc aaactaaact ggttcctgcc acaatcctcg
661 aaccagttct tagaactgag gcttcaggga caacagcagt tcctgctaca atctttgaac
721 cagtttctcc tataaaagag gctccaggga caacattcgt tcctgttaca gacctcgagc
781 ctgttacttt tagaactgag atccctgcaa caaccttagc taccaaaaca tcaaaaagaa
841 cccgccctcc acgtcccaga cctaaaacta caccgagccc tcaggcacct gagaccaaac
901 ctgttcctgc tacagtccta gaacctgtca ctcttagacc tgaggcctca acaacattag
961 cttccaaaac atcacaacgg acacgtcgtc cacgtctcag aacaaaaacc acaccacgtc
1021 ctgaagcacc tgaatccaaa ccagttccta ctgcggagct caaacctgtt acactcagaa
1081 ctgagacttg ggtgacaaca caagctccta aaacatcaca acgaactcgt cgtccacgtc
1141 ccaaaactaa aaccacacca agtcctgagg ttcctcaaac caaactggtt ccttctacag
1201 atcttgaacc tggtactctc agaactgaag ctccaaaaac catggttgtt actacagtcc
1261 ttgaacctga cacttttaga accaagtttc cagaaacaac gttagctcct aaaacacaac
1321 ggacacgtcg tccccgtccc agacccaaaa ctacatcaag tcctgaagta cctcagaaca
1381 aatcggtttc tgttacaggc tttgaacctg ttgttcatag tactgatgct ccaggaacaa
1441 catttgctct gactgaactg caaactctta ttttgaaacc agtgacatca ccaagcctag
1501 aaatgacaga aagtcaacct gtttctgatg ttctggaatc ggttacactt agtactgagt
1561 caccaaagga gaccatagca ccagccaaaa cagactatgt atatcccact gccaaagcac
1621 cactctggcc agaggagcca aagactgaag ttgtggaatc tattacatat gtatctgaac
1681 cacctgagac cacactagaa acgtcgcctc tgccttctca atctataacc ctacccagcc
1741 cagatgagcc tcagactgaa cctgctccca agcagacacc acgtgctcct cctaagccaa
1801 aaacatcacc acgcccaaga atcccacaaa cacaaccagt tcctaaggtg ccccagcgtg
1861 ttactgcaaa accaaaaacg tcaccaagtc cagaagtgtc atacaccaca cctgctccaa
1921 aagatgtgct ccttcctcat aaaccatacc ctgaggtctc tcagagcgaa cctgctcctc
1981 tagagacacg aggcatccct tttataccca tgatttcccc aagtcctagt caagaggaac
2041 tacagaccac tctggaagaa acagaccaat ccacccaaga acctttcaca actaagattc
2101 cacgaacaac tgaactagca aagacaactc aggcgccaca cagattttat actactgtga
2161 ggcccagaac atctgacaag ccacacatca gacctggggt caagcaagca cccaggccat
2221 caggtgctga tagaaatgta tcagtggact ctacccaccc cactaaaaag ccagggactc
2281 gccgcccacc cttgccaccc agacctacac acccacgaag aaaaccttta ccaccaaata
2341 atgtcactgg aaagccagga agtgcaggaa tcatttcatc aggcccaata actacaccac
2401 ccctgaggtc aacacccagg cctactggaa ctcccttgga gagaatagag acagatataa
2461 agcaaccaac agttcctgcc tctggagaag aactggaaaa tataactgac tttagctcaa
2521 gcccaacaag agaaactgat cctcttggga agccaagatt caaaggacct catgtgcgat
2581 acatccaaaa gcctgacaac agtccctgct ccattactga ctctgtcaaa cggttcccca
2641 aagaggaggc cacagagggg aatgccacca gcccaccaca gaacccaccc accaacctca
2701 ctgtggtcac cgtggaaggg tgcccctcat ttgtcatctt ggactgggaa aagccactaa
2761 atgacactgt cactgaatat gaagttatat ccagagaaaa tgggtcattc agtgggaaga
2821 acaagtccat tcaaatgaca aatcagacat tttccacagt agaaaatctg aaaccaaaca
2881 cgagttatga attccaggtg aaacccaaaa acccgcttgg tgaaggcccg gtcagcaaca
2941 cagtggcatt cagtactgaa tcagcggacc caagagtgag tgagccagtt tctgcaggaa
3001 gagatgccat ctggactgaa agacccttta attcagactc ttactcagag tgtaagggca
3061 aacaatatgt caaaaggaca tggtataaaa agtttgtagg agtgcagctg tgcaactctc
3121 tcagatacaa gatttacttg agcgactccc tcacaggaaa attttataac ataggtgatc
3181 agaggggcca tggagaagat cactgccagt ttgtggattc atttttagat ggacgcactg
3241 ggcagcaact cacttctgac cagttaccaa tcaaagaagg ttatttcaga gcagttcgcc
3301 aggaacctgt ccaatttgga gaaataggtg gtcacaccca aatcaattat gttcagtggt
3361 atgaatgtgg gactacaatt cctggaaaat ggtagatgct gcacaaagtt accttctgtt
3421 tcatcattgc aaacaaaaat cattgaaaat actatgccgc attcatttaa agctattttg
3481 tttactatgt ataaaagtct acaatctaat taatagcaat actagatgtt tattattaga
3541 aaagattgct gagagtattt atcaggtttt acaaagtcat tttaagaaag caagatactg
3601 atgttaacag aataacattt ttggggaagc tggctcccta ttcatggtat
//