LOCUS AK299922 1733 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ55583 complete cds, highly similar to
Polypyrimidine tract-binding protein 2.
ACCESSION AK299922
VERSION AK299922.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1733)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1733
/clone="OCBBF3025790"
/clone_lib="OCBBF3"
/db_xref="H-InvDB:HIT000494546"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 75..1697
/codon_start=1
/note="highly similar to Polypyrimidine tract-binding
protein 2"
/protein_id="BAG61757.1"
/transl_table=1
/translation="MDGYVIGPARRIVTEVAVGVKRGSDELLSGSVLSSPNSNMSSMV
VTANGNDSKKFKGEDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKEK
NQAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNTLNQRAQAVLQA
VTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFSKFGAVLKI
ITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYNACCTLRIDFSKLVNLNVKYNNDK
SRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLAVPGALSPLAIPNAAAAAAAAAAGR
VGMPGVSAGGNTVLLVSNLNEEMVTPQSLFTLFGVYGDVQRVKILYNKKDSALIQMAD
GNQSQLAMNHLNGQKMYGKIIRVTLSKHQTVQLPREGLDDQGLTKDFGNSPLHRFKKP
GSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANTGGTVKAFKFFQRDHKMALLQMA
TVEEAIQALIDLHNYNLGENHHLRVSFSKSTI"
BASE COUNT 518 a 358 c 373 g 484 t
ORIGIN
1 attttctcgc cgcttgtgtg gctcgctggc tgcgtggctc ggttcttgtg agcgaagctt
61 tgtccggttc ggcaatggac gggtatgtaa tcgggccggc gagaagaatc gtcactgagg
121 ttgcagttgg cgtgaagaga ggatctgacg aactactctc aggcagtgtt ctcagtagtc
181 cgaactctaa tatgagcagc atggtagtta cagccaatgg taatgatagt aaaaaattta
241 aaggagaaga taaaatggat ggtgctcctt ctcgtgtact tcatattcga aaattacctg
301 gggaagtaac agaaactgaa gttattgctt taggcttacc ttttggtaag gtgaccaaca
361 tccttatgct gaaagaaaaa aatcaggcat ttttggaact agcaaccgag gaagcagcta
421 ttactatggt taattactat tctgctgtga cacctcatct tcgtaaccaa ccaatatata
481 tccagtactc gaatcacaaa gaactaaaga cagataatac attaaaccaa cgtgctcagg
541 cagttcttca agctgtgaca gctgtccaga cagcaaatac tcctcttagt ggcaccacag
601 ttagcgagag tgcagtgact ccagcccaga gtccagtact tagaataatt attgacaaca
661 tgtactaccc tgtaacactt gatgttcttc accaaatatt ttctaagttt ggtgctgtat
721 tgaagataat cacatttaca aaaaataacc agtttcaagc tttgctccag tatggtgatc
781 cagtaaatgc tcaacaagca aaactagccc tagatggtca gaatatttat aatgcctgct
841 gtaccctaag gattgatttt tccaaacttg tgaatttgaa tgtaaaatac aacaatgata
901 aaagtaggga ttatactcga cctgatcttc catctgggga tggacaacct gcattggacc
961 cagctattgc tgcagcattt gccaaggaga catccctctt agctgttcca ggagctctga
1021 gtcctttggc cattccaaat gctgctgcag cagctgctgc agctgctgct ggccgagtgg
1081 gtatgcctgg agtctcagct ggtggcaata cagtcctgtt ggttagcaat ttaaatgaag
1141 agatggttac gccccaaagt ctgtttaccc tcttcggtgt ttatggagat gtgcagcgtg
1201 tgaagatttt atacaataag aaagacagcg ctctaataca gatggctgat ggaaaccaat
1261 cacaacttgc catgaatcat cttaatggac agaaaatgta tggaaaaatt attcgtgtta
1321 ctctgtctaa acatcagact gtacagctac ctcgagaggg acttgatgat caagggctaa
1381 caaaagattt tggtaattcc ccattgcatc gttttaagaa acctggatcc aaaaattttc
1441 aaaacatttt tcctccttct gccacccttc acctatctaa tatccctcca tcagtagcag
1501 aagaggatct acgaacactg ttcgctaaca ctgggggcac tgtgaaagca tttaagtttt
1561 ttcaaagaga tcacaaaatg gctcttcttc agatggcaac agtggaagaa gctattcagg
1621 ccttgattga tcttcataat tataaccttg gagaaaacca tcatctgaga gtgtctttct
1681 ccaagtcaac aatttaaaaa tgggaagatg aagattgggg gtgaatcaca ttg
//