LOCUS AK299897 1965 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ55936 complete cds, highly similar to
Polypyrimidine tract-binding protein 2.
ACCESSION AK299897
VERSION AK299897.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1965)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1965
/clone="OCBBF3023676"
/clone_lib="OCBBF3"
/db_xref="H-InvDB:HIT000494521"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 165..1811
/codon_start=1
/note="highly similar to Polypyrimidine tract-binding
protein 2"
/protein_id="BAG61740.1"
/transl_table=1
/translation="MWSNLTFSFFGLRTKAKKYVTVNNRGSDELLSGSVLSSPNSNMS
SMVVTANGNDSKKFKGEDKMDGAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILML
KGKNQAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNTLNQRAQAV
LQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLHQIFSKFGAV
LKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYNACCTLRIDFSKLVNLNVKYN
NDKSRDYTRPDLPSGDGQPALDPAIAAAFAKETSLLGLPVAAVPGALSPLAIPNAAAA
AAAAAAGRVGMPGVSAGGNTVLLVSNLNEEMVTPQSLFTLFGVYGDVQRVKILYNKKD
SALIQMADGNQSQLAMNHLNGQKMYGKIIRVTLSKHQTVQLPREGLDDQGLTKDFGNS
PLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANTGGTVKAFKFFQRDH
KMALLQMATVEEAIQALIDLHNYNLGENHHLRVSFSKSTI"
BASE COUNT 573 a 386 c 417 g 589 t
ORIGIN
1 gtggctcggt tcttgtgagc gaagctttgt ccggttcggc aatggacgga atcgtcactg
61 aggttgcagt tggcgtgaag aatatctgat ctggacttct gtggatttat ggaagagctg
121 gctttatttc tctatcctgt gggaggggca aactttgatt ttgtatgtgg agtaacttga
181 ccttcagttt ttttggtctg agaacaaagg ccaaaaaata tgtaacagtt aataacagag
241 gatctgacga actactctca ggcagtgttc tcagtagtcc gaactctaat atgagcagca
301 tggtagttac agccaatggt aatgatagta aaaaatttaa aggagaagat aaaatggatg
361 gtgctccttc tcgtgtactt catattcgaa aattacctgg ggaagtaaca gaaactgaag
421 ttattgcttt aggcttacct tttggtaagg tgaccaacat ccttatgctg aaaggaaaaa
481 atcaggcatt tttggaacta gcaaccgagg aagcagctat tactatggtt aattactatt
541 ctgctgtgac acctcatctt cgtaaccaac caatatatat ccagtactcg aatcacaaag
601 aactaaagac agataataca ttaaaccaac gtgctcaggc agttcttcaa gctgtgacag
661 ctgtccagac agcaaatact cctcttagtg gcaccacagt tagcgagagt gcagtgactc
721 cagcccagag tccagtactt agaataatta ttgacaacat gtactaccct gtaacacttg
781 atgttcttca ccaaatattt tctaagtttg gtgctgtatt gaagataatc acatttacaa
841 aaaataacca gtttcaagct ttgctccagt atggtgatcc agtaaatgct caacaagcaa
901 aactagccct agatggtcag aatatttata atgcctgctg taccctaagg attgattttt
961 ccaaacttgt gaatttgaat gtaaaataca acaatgataa aagtagggat tatactcgac
1021 ctgatcttcc atctggggat ggacaacctg cattggaccc agctattgct gcagcatttg
1081 ccaaggagac atccctctta gggcttcctg ttgcagctgt tccaggagct ctgagtcctt
1141 tggccattcc aaatgctgct gcagcagctg ctgcagctgc tgctggccga gtgggtatgc
1201 ctggagtctc agctggtggc aatacagtcc tgttggttag caatttaaat gaagagatgg
1261 ttacgcccca aagtctgttt accctcttcg gtgtttatgg agatgtgcag cgtgtgaaga
1321 ttttatacaa taagaaagac agcgctctaa tacagatggc tgatggaaac caatcacaac
1381 ttgccatgaa tcatcttaat ggacagaaaa tgtatggaaa aattattcgt gttactctgt
1441 ctaaacatca gactgtacag ctacctcgag agggacttga tgatcaaggg ctaacaaaag
1501 attttggtaa ttccccattg catcgtttta agaaacctgg atccaaaaat tttcaaaaca
1561 tttttcctcc ttctgccacc cttcacctat ctaatatccc tccatcagta gcagaagagg
1621 atctacgaac actgttcgct aacactgggg gcactgtgaa agcatttaag ttttttcaaa
1681 gagatcacaa aatggctctt cttcagatgg caacagtgga agaagctatt caggccttga
1741 ttgatcttca taattataac cttggagaaa accatcatct gagagtgtct ttctccaagt
1801 caacaattta aaaatgggaa gatgaagatt gggggtgaat cacattgttc aatgtcatca
1861 cctatttgac tgttcagaaa agtggggacc agagtttgat tttttttgtt tttgtttttt
1921 tggggtttct tttttttttc catgctgtta tcattccttg gttat
//