LOCUS AK299870 3933 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ61703 partial cds, highly similar to Neuronal
cell adhesion molecule precursor.
ACCESSION AK299870
VERSION AK299870.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3933)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3933
/clone="OCBBF3021188"
/clone_lib="OCBBF3"
/db_xref="H-InvDB:HIT000494494"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 475..>3933
/codon_start=1
/note="highly similar to Neuronal cell adhesion molecule
precursor"
/protein_id="BAH13156.1"
/transl_table=1
/translation="MQLKIMPKKKRLSAGRVPLILFLCQMISALEVPLDPKLLEDLVQ
PPTITQQSPKDYIIDPRENIVIQCEAKGKPPPSFSWTRNGTHFDIDKDPLVTMKPGTG
TLIINIMSEGKAETYEGVYQCTARNERGAAVSNNIVVRPSRSPLWTKEKLEPITLQSG
QSLVLPCRPPIGLPPPIIFWMDNSFQRLPQSERVSQGLNGDLYFSNVLPEDTREDYIC
YARFNHTQTIQQKQPISVKVISVDELNDTIAANLSDTEFYGAKSSRERPPTFLTPEGN
ASNKEELRGNVLSLECIAEGLPTPIIYWAKEDGMLPKNRTVYKNFEKTLQIIHVSEAD
SGNYQCIAKNALGAIHHTISVRVKAAPYWITAPQNLVLSPGEDGTLICRANGNPKPRI
SWLTNGVPIEIAPDDPSRKIDGDTIIFSNVQERSSAVYQCNASNEYGYLLANAFVNVL
AEPPRILTPANTLYQVIANRPALLDCAFFGSPLPTIEWFKGAKGSALHEDIYVLHENG
TLEIPVAQKDSTGTYTCVARNKLGMAKNEVHLEIKDATWIVKQPEYAVVQRGSMVSFE
CKVKHDHTLSLTVLWLKDNRELPSDERFTVDKDHLVVADVSDDDSGTYTCVANTTLDS
VSASAVLSVVAPTPTPAPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFII
EYEDAMHKPGLWHHQTEVSGTQTTAQLKLSPYVNYSFRVMAVNSIGKSLPSEASEQYL
TKASEPDKNPTAVEGLGSEPDNLVITWKPLNGFESNGPGLQYKVSWRQKDGDDEWTSV
VVANVSKYIVSGTPTFVPYLIKVQALNDMGFAPEPAVVMGHSGEDLPMVAPGNVRVNV
VNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGM
LPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGVPSAPSSLKIVNPTLDSLTLEW
DPPSHPNGILTEYTLKYQPINSTHELGPLVDLKIPANKTRWTLKNLNFSTRYKFYFYA
QTSAGSGSQITEEAVTTVDEAGILPPDVGAGKAMASRQVDIATQGWFIGLMCAVALLI
LILLIVCFIRRNKGGKYPVKEKEDAHADPEIQPMKEDDGTFGEYSDAEDHKPLKKGSR
TPSDRTV"
BASE COUNT 1178 a 891 c 924 g 940 t
ORIGIN
1 agacgcgcgg gcgcggggga cggcgcaggg gccgcctggc tggagcagcc agaggggata
61 gcttcgtcga gaacggagga caccggcggt ccagggtcct gggcagtcgc gccagagctg
121 agcggagggc gcggcgcgag aacgaatctt tgtgacattc tctctcagca ttctttatcc
181 cctgtttgct gaagacttcg accaaagctg gtcttagctg ttggcattct cctgagaaaa
241 ggatagcttc agaaatcaga aaaacatttg ggaggtgtct agcccagtgg accttctgaa
301 gagcaatgct aagaagacgt ttggtttaaa gaattaaaag gaagaacaac ttaagagctt
361 cttcaaagtt ccccgcatga aaattactta aacgttgcac acaacgtttc acaaaatctt
421 ttgtgaaaga agaaaaggaa attcagtgtg tgagtctcag caggagttaa gctaatgcag
481 cttaaaataa tgccgaaaaa gaagcgctta tctgcgggca gagtgcccct gattctcttc
541 ctgtgccaga tgattagtgc actggaagta cctcttgatc caaaacttct tgaagacttg
601 gtacagcctc caaccatcac ccaacagtct ccaaaagatt acattattga ccctcgggag
661 aatattgtaa tccagtgtga agccaaaggg aaaccgcccc caagcttttc ctggacccgt
721 aatgggactc attttgacat cgataaagac cctctggtca ccatgaagcc tggcacagga
781 acgctcataa ttaacatcat gagcgaaggg aaagctgaga cctatgaagg agtctatcag
841 tgtacagcaa ggaatgaacg cggagctgca gtttctaata acattgttgt ccgcccatcc
901 agatcaccat tgtggaccaa agaaaaactt gaaccaatca cacttcaaag tggtcagtct
961 ttagtacttc cctgcagacc cccaattgga ttaccaccac ctataatatt ttggatggat
1021 aattcctttc aaagacttcc acaaagtgag agagtttctc aaggtttgaa tggggacctt
1081 tatttttcca atgtcctccc agaggacacc cgcgaagact atatctgtta tgctagattt
1141 aatcatactc aaaccataca gcagaagcaa cctatttctg tgaaggtgat ttcagtggat
1201 gaattgaatg acactatagc tgctaatttg agtgacactg agttttatgg tgctaaatca
1261 agtagagaga ggccaccaac atttttaact ccagaaggca atgcaagtaa caaagaggaa
1321 ttaagaggaa atgtgctttc actggagtgc attgcagaag gactgcctac cccaattatt
1381 tactgggcaa aggaagatgg aatgctaccc aaaaacagga cagtttataa gaactttgag
1441 aaaaccttgc agatcattca tgtttcagaa gcagactctg gaaattacca atgtatagca
1501 aaaaatgcat taggagccat ccaccatacc atttctgtta gagttaaagc ggctccatac
1561 tggatcacag cccctcaaaa tcttgtgctg tccccaggag aggatgggac cttgatctgc
1621 agagctaatg gcaaccccaa acccagaatt agctggttaa caaatggagt cccaatagaa
1681 attgcccctg atgaccccag cagaaaaata gatggcgata ccattatttt ttcaaatgtt
1741 caagaaagat caagtgcagt atatcagtgc aatgcctcta atgaatatgg atatttactg
1801 gcaaacgcat ttgtaaatgt gctggctgag ccaccacgaa tcctcacacc tgcaaacaca
1861 ctctaccagg tcattgcaaa caggcctgct ttactagact gtgccttctt tgggtctcct
1921 ctcccaacca tcgagtggtt taaaggagct aaaggaagtg ctcttcatga agatatttat
1981 gttttacatg aaaatggaac tttggaaatt cctgtggccc aaaaggacag tacaggaact
2041 tatacgtgtg ttgcaaggaa taaattaggg atggcaaaga atgaagttca cttagaaatc
2101 aaagatgcta catggatcgt taaacagccc gaatatgcag ttgtgcaaag agggagcatg
2161 gtgtcctttg aatgcaaagt gaaacatgat cacaccttat ccctcactgt cctgtggctg
2221 aaggacaaca gggaactgcc cagtgatgaa aggttcactg ttgacaagga tcatctagtg
2281 gtagctgatg tcagtgacga tgacagcggg acctacacgt gtgtggccaa caccactctg
2341 gacagcgtct ccgccagcgc tgtgcttagc gttgttgctc ctactccaac tccagctccc
2401 gtttacgatg tcccaaatcc tccctttgac ttagaactga cagatcaact tgacaaaagt
2461 gttcagctgt catggacccc aggcgatgac aacaatagcc ccattacaaa attcatcatc
2521 gaatatgaag atgcaatgca caagccaggg ctgtggcacc accaaactga agtttctgga
2581 acacagacca cagcccagct gaagctgtct ccttacgtga actactcctt ccgcgtgatg
2641 gcagtgaaca gcattgggaa gagcttgccc agcgaggcct ctgagcagta tttgacgaaa
2701 gcctcagaac cagataaaaa ccccacagct gtggaaggac tgggatcaga gcctgataat
2761 ttggtgatta cgtggaagcc cttgaatggt ttcgaatcta atgggccagg ccttcagtac
2821 aaagttagct ggcgccagaa agatggtgat gatgaatgga catctgtggt tgtggcaaat
2881 gtatccaaat atattgtctc aggcacgcca acctttgttc catacctgat caaagttcag
2941 gccctgaatg acatggggtt tgcccccgag ccagctgtag tcatgggaca ttctggagaa
3001 gacctcccaa tggtggctcc tgggaacgtg cgtgtgaatg tggtgaacag taccttagcc
3061 gaggtgcact gggacccagt acctctgaaa agcatccgag gacacctaca aggctatcgg
3121 atttactatt ggaagaccca gagttcatct aaaagaaaca gacgtcacat tgagaaaaag
3181 atcctcacct tccaaggcag caagactcat ggcatgttgc cggggctaga gccctttagc
3241 cactacacac tgaatgtccg agtggtcaat gggaaagggg agggcccagc cagccctgac
3301 agagtcttta atactccaga aggagtcccc agtgctccct cgtctttgaa gattgtgaat
3361 ccaacactgg actctctcac tttggaatgg gatccaccga gccacccgaa tggcattttg
3421 acagagtaca ccttaaagta tcagccaatt aacagcacac atgaattagg ccctctggta
3481 gatttgaaaa ttcctgccaa caagacacgg tggactttaa aaaatttaaa tttcagcact
3541 cgatataagt tttatttcta tgcacaaaca tcagcaggat caggaagtca aattacagag
3601 gaagcagtaa caactgtgga tgaagctggt attcttccac ctgatgtagg tgcaggcaaa
3661 gcgatggcaa gccggcaggt ggatattgca actcagggct ggttcattgg tctgatgtgt
3721 gctgttgctc tccttatctt aattttgctg attgtttgct tcatcagaag aaacaagggt
3781 ggtaaatatc cagttaaaga aaaggaagat gcccatgctg accctgaaat ccagcctatg
3841 aaggaagatg atgggacatt tggagaatac agtgatgcag aagaccacaa gcctttgaaa
3901 aaaggaagtc gaactccttc agacaggact gtg
//