LOCUS AK299850 1979 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ56029 complete cds, highly similar to
Nucleolar protein 4.
ACCESSION AK299850
VERSION AK299850.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1979)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1979
/clone="OCBBF3009365"
/clone_lib="OCBBF3"
/db_xref="H-InvDB:HIT000494474"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 32..1726
/codon_start=1
/note="highly similar to Nucleolar protein 4"
/protein_id="BAG61712.1"
/transl_table=1
/translation="MADLMQETFLHHATDGVGVDEKLSLRRVAVVEDFFDIIYSMHVE
TGPNGEQIRKHAGQKRTYKAISESYAFLPREAVTRFLMSCSECQKRMHLNPDGTDHKD
NGKPPTLVTSMIDYNMPITMAYMKHMKLQLLNSQQDEDESSIESDEFDMSDSTRMSAV
NSDLSSNLEERMQSPQNLHGQQDDDSAAESFNGNETLGHSSIASGGTHSREMGDSNSD
GKTGLEQDEQPLNLSDSPLSAQLTSEYRIDDHNSNGKNKYKNLLISDLKMEREARENG
SKSPAHSYSSYDSGKNESVDRGAEDLSLNRGDEDEDDHEDHDDSEKVNETDGVEAERL
KAFNMFVRLFVDENLDRMVPISKQPKEKIQAIIDSCRRQFPEYQERARKRIRTYLKSC
RRMKRSGFEMSRPIPSHLTSAVAESILASACESESRNAAKRMRLERQQDESAPADKQC
KPEATQATYSTSAVPGSQDVLYINGNGTYSYHSYRGLGGGLLNLNDASSSGPTDLSMK
RQLATSSGSSSSSNSRPQLSPTEINAVRQLVAGYRESAAFLLRSADELENLILQQN"
BASE COUNT 616 a 418 c 482 g 463 t
ORIGIN
1 aagaagatgg gaactgtggg ctacaagtag gatggcagat ctgatgcagg agacctttct
61 gcatcatgcc acggatggcg taggggtaga tgagaagcta tctttacgac gggtagctgt
121 ggttgaagat ttctttgaca ttatttattc gatgcatgtg gaaacggggc caaatggaga
181 acaaattcgg aaacacgctg gacaaaagag aacttacaaa gcaatttcag agagctatgc
241 cttcctacca agagaagcgg tgacacgatt tctaatgagc tgctcagagt gccagaaaag
301 aatgcattta aacccagatg gaacagatca taaagataat ggaaaacctc ccactttggt
361 gaccagcatg attgactaca acatgccaat taccatggcc tacatgaaac acatgaagct
421 gcagctgcta aactcacagc aagatgagga tgaaagttca atagaaagtg atgaatttga
481 catgagtgat tcaacacgga tgtcagctgt gaactctgat cttagctcca atcttgaaga
541 aagaatgcaa agtccccaga atcttcatgg ccagcaagat gatgattctg ctgcagagag
601 ctttaatggc aatgagactc tggggcacag ttcaattgct tcagggggaa cacacagcag
661 ggagatggga gactccaaca gtgatggcaa aactgggctg gagcaagatg aacagccact
721 gaacctgagt gacagtcccc tctctgcgca gctaacttcg gaatacagaa tagatgatca
781 caacagtaat gggaaaaaca agtataagaa tcttctaatt tctgacctca agatggaacg
841 agaggcgaga gaaaatggaa gcaagtctcc tgcacatagt tactccagct atgactctgg
901 caaaaatgag agtgtagacc gaggagctga ggacctctca ctaaacaggg gagatgagga
961 cgaagatgac cacgaggacc atgacgattc ggagaaagtt aatgagacag acggcgttga
1021 agccgagcgg ctgaaagctt ttaatatgtt tgtcaggctg tttgtagatg aaaacttgga
1081 ccgaatggtc ccaatctcta agcagcccaa agaaaagatc caggctatca ttgactcatg
1141 caggcgacaa ttccctgagt atcaagagcg tgccagaaaa cgtatacgta cttacctcaa
1201 gtcctgcagg cggatgaaaa gaagtggttt tgagatgtct cgacctattc cttcccacct
1261 tacttcagca gttgcagaga gtatcttggc ttcagcttgt gagagtgaga gtagaaatgc
1321 cgccaagagg atgcgtctgg agagacagca ggatgagtct gctccagctg acaaacagtg
1381 taaaccagag gcgacccagg ccacttactc aacatcagct gttccaggct cacaggacgt
1441 gctgtacatc aatggaaatg ggacctatag ttaccatagt tacagagggc taggaggggg
1501 tctgctaaat ctgaatgatg cttccagcag tggacccact gatctcagca tgaagagaca
1561 attggcgact agctcaggat cctccagcag ctcaaactcc agaccccagc tgagtccaac
1621 tgaaatcaat gccgtgagac agcttgttgc aggatatcga gaatcagctg catttttatt
1681 gcgatctgca gatgaactgg aaaatctcat tttacaacag aactgagaca gacgaccacc
1741 atattcactg aggtctaaat ttgcagtttc cactaatgac attttgattt cccaacagag
1801 atacttctgg tcttactgca cagtctttta agagaaatac ttccattatg ccacattgtc
1861 cttgatccgt aagtgatgtg ttaaggtgct tcaaaggaac tctgacctct gaagtacttg
1921 agctacttta gtatgtccag cctattgctt tttgttttag tgtgtcacca taaatatca
//