LOCUS AK299843 3809 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ57034 complete cds, highly similar to
Serine-protein kinase ATM (EC 2.7.11.1).
ACCESSION AK299843
VERSION AK299843.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3809)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3809
/clone="OCBBF3008704"
/clone_lib="OCBBF3"
/db_xref="H-InvDB:HIT000494467"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 115..3387
/codon_start=1
/note="highly similar to Serine-protein kinase ATM (EC
2.7.11.1)"
/protein_id="BAG61705.1"
/transl_table=1
/translation="MDDQEKRSLAFEEGSQSTTISSLSEKSKEETGISLQDLLLEIYR
SIGEPDSLYGCGGGKMLQPITRLRTYEHEAMWGKALVTYDLETAIPSSTRQAGIIQAL
QNLGLCHILSVYLKGLDYENKDWCPELEELHYQAAWRNMQWDHCTSVSKEVEGTSYHE
SLYNALQSLRDREFSTFYESLKYARVKEVEEMCKRSLESVYSLYPTLSRLQAIGELES
IGELFSRSVTHRQLSEVYIKWQKHSQLLKDSDFSFQEPIMALRTVILEILMEKEMDNS
QRECIKDILTKHLVELSILARTFKNTQLPERAIFQIKQYNSVSCGVSEWQLEEAQVFW
AKKEQSLALSILKQMIKKLDASCAANNPSLKLTYTECLRVCGNWLAETCLENPAVIMQ
TYLEKAVEVAGNYDGESSDELRNGKMKAFLSLARFSDTQHQRIENYMKSSEFENKQAL
LKRAKEEVGLLREHKIQTNRYTVKVQRELELDELALRALKEDRKRFLCKAVENYINCL
LSGEEHDMWVFRLCSLWLENSGVSEVNGMMKRDGMKIPTYKFLPLMYQLAARMGTKMM
GGLGFHEVLNNLISRISMDHPHHTLFIILALANANRDEFLTKPEVARRSRITKNVPKQ
SSQLDEDRTEAANRIICTIRSRRPQMVRSVEALCDAYIILANLDATQWKTQRKGINIP
ADQPITKLKNLEDVVVPTMEIKVDHTGEYGNLVTIQSFKAEFRLAGGVNLPKIIDCVG
SDGKERRQLVKGRDDLRQDAVMQQVFQMCNTLLQRNTETRKRKLTICTYKVVPLSQRS
GVLEWCTGTVPIGEFLVNNEDGAHKRYRPNDFSAFQCQKKMMEVQKKSFEEKYEVFMD
VCQNFQPVFRYFCMEKFLDPAIWFEKRLAYTRSVATSSIVGYILGLGDRHVQNILINE
QSAELVHIDLGVAFEQGKILPTPETVPFRLTRDIVDGMGITGVEGVFRRCCEKTMEVM
RNSQETLLTIVEVLLYDPLFDWTMNPLKALYLQQRPEDETELHPTLNADDQECKRNLS
DIDQSFNKVAERVLMRLQEKLKGVEEGTVLSVGGQVNLLIQQAIDPKNLSRLFPGWKA
WV"
BASE COUNT 1224 a 704 c 875 g 1006 t
ORIGIN
1 aatgatgctt tctggctgga tttaaattat ctagaagttg ccaaggtagc tcagtcttgt
61 gctgctcact ttacagcttt actctatgca gaaatctatg cagataagaa aagtatggat
121 gatcaagaga aaagaagtct tgcatttgaa gaaggaagcc agagtacaac tatttctagc
181 ttgagtgaaa aaagtaaaga agaaactgga ataagtttac aggatcttct cttagaaatc
241 tacagaagta taggggagcc agatagtttg tatggctgtg gtggagggaa gatgttacaa
301 cccattacta gactacgaac atatgaacac gaagcaatgt ggggcaaagc cctagtaaca
361 tatgacctcg aaacagcaat cccctcatca acacgccagg caggaatcat tcaggccttg
421 cagaatttgg gactctgcca tattctttcc gtctatttaa aaggattgga ttatgaaaat
481 aaagactggt gtcctgaact agaagaactt cattaccaag cagcatggag gaatatgcag
541 tgggaccatt gcacttccgt cagcaaagaa gtagaaggaa ccagttacca tgaatcattg
601 tacaatgctc tacaatctct aagagacaga gaattctcta cattttatga aagtctcaaa
661 tatgccagag taaaagaagt ggaagagatg tgtaagcgca gccttgagtc tgtgtattcg
721 ctctatccca cacttagcag gttgcaggcc attggagagc tggaaagcat tggggagctt
781 ttctcaagat cagtcacaca tagacaactc tctgaagtat atattaagtg gcagaaacac
841 tcccagcttc tcaaggacag tgattttagt tttcaggagc ctatcatggc tctacgcaca
901 gtcattttgg agatcctgat ggaaaaggaa atggacaact cacaaagaga atgtattaag
961 gacattctca ccaaacacct tgtagaactc tctatactgg ccagaacttt caagaacact
1021 cagctccctg aaagggcaat atttcaaatt aaacagtaca attcagttag ctgtggagtc
1081 tctgagtggc agctggaaga agcacaagta ttctgggcaa aaaaggagca gagtcttgcc
1141 ctgagtattc tcaagcaaat gatcaagaag ttggatgcca gctgtgcagc gaacaatccc
1201 agcctaaaac ttacatacac agaatgtctg agggtttgtg gcaactggtt agcagaaacg
1261 tgcttagaaa atcctgcggt catcatgcag acctatctag aaaaggcagt agaagttgct
1321 ggaaattatg atggagaaag tagtgatgag ctaagaaatg gaaaaatgaa ggcatttctc
1381 tcattagccc ggttttcaga tactcaacac caaagaattg aaaactacat gaaatcatcg
1441 gaatttgaaa acaagcaagc tctcctgaaa agagccaaag aggaagtagg tctccttagg
1501 gaacataaaa ttcagacaaa cagatacaca gtaaaggttc agcgagagct ggagttggat
1561 gaattagccc tgcgtgcact gaaagaggat cgtaaacgct tcttatgtaa agcagttgaa
1621 aattatatca actgcttatt aagtggagaa gaacatgata tgtgggtatt ccgactttgt
1681 tccctctggc ttgaaaattc tggagtttct gaagtcaatg gcatgatgaa gagagacgga
1741 atgaagattc caacatataa atttttgcct cttatgtacc aattggctgc tagaatgggg
1801 accaagatga tgggaggcct aggatttcat gaagtcctca ataatctaat ctctagaatt
1861 tcaatggatc acccccatca cactttgttt attatactgg ccttagcaaa tgcaaacaga
1921 gatgaatttc tgactaaacc agaggtagcc agaagaagca gaataactaa aaatgtgcct
1981 aaacaaagct ctcagcttga tgaggatcga acagaggctg caaatagaat aatatgtact
2041 atcagaagta ggagacctca gatggtcaga agtgttgagg cactttgtga tgcttatatt
2101 atattagcaa acttagatgc cactcagtgg aagactcaga gaaaaggcat aaatattcca
2161 gcagaccagc caattactaa acttaagaat ttagaagatg ttgttgtccc tactatggaa
2221 attaaggtgg accacacagg agaatatgga aatctggtga ctatacagtc atttaaagca
2281 gaatttcgct tagcaggagg tgtaaattta ccaaaaataa tagattgtgt aggttccgat
2341 ggcaaggaga ggagacagct tgttaagggc cgtgatgacc tgagacaaga tgctgtcatg
2401 caacaggtct tccagatgtg taatacatta ctgcagagaa acacggaaac taggaagagg
2461 aaattaacta tctgtactta taaggtggtt cccctctctc agcgaagtgg tgttcttgaa
2521 tggtgcacag gaactgtccc cattggtgaa tttcttgtta acaatgaaga tggtgctcat
2581 aaaagataca ggccaaatga tttcagtgcc tttcagtgcc aaaagaaaat gatggaggtg
2641 caaaaaaagt cttttgaaga gaaatatgaa gtcttcatgg atgtttgcca aaattttcaa
2701 ccagttttcc gttacttctg catggaaaaa ttcttggatc cagctatttg gtttgagaag
2761 cgattggctt atacgcgcag tgtagctact tcttctattg ttggttacat acttggactt
2821 ggtgatagac atgtacagaa tatcttgata aatgagcagt cagcagaact tgtacatata
2881 gatctaggtg ttgcttttga acagggcaaa atccttccta ctcctgagac agttcctttt
2941 agactcacca gagatattgt ggatggcatg ggcattacgg gtgttgaagg tgtcttcaga
3001 agatgctgtg agaaaaccat ggaagtgatg agaaactctc aggaaactct gttaaccatt
3061 gtagaggtcc ttctatatga tccactcttt gactggacca tgaatccttt gaaagctttg
3121 tatttacagc agaggccgga agatgaaact gagcttcacc ctactctgaa tgcagatgac
3181 caagaatgca aacgaaatct cagtgatatt gaccagagtt tcaacaaagt agctgaacgt
3241 gtcttaatga gactacaaga gaaactgaaa ggagtggaag aaggcactgt gctcagtgtt
3301 ggtggacaag tgaatttgct catacagcag gccatagacc ccaaaaatct cagccgactt
3361 ttcccaggat ggaaagcttg ggtgtgatct tcagtatatg aattaccctt tcattcagcc
3421 tttagaaatt atattttagc ctttattttt aacctgccaa catactttaa gtagggatta
3481 atatttaagt gaactattgt gggttttttt gaatgttggt tttaatactt gatttaatca
3541 ccactcaaaa atgttttgat ggtcttaagg aacatctctg ctttcactct ttagaaataa
3601 tggccattcg ggctgggcgc ggcggctcac gcctgtgatc ccagcacttt gggaggccga
3661 ggtgagcgga tcacgaggtc aggagttcga gaccagcctg gccaagagac cagcctggcc
3721 agtatggtga aaccctgtct ctactagaaa tacaaaaatt ggccgagcat ggtggcgggc
3781 acctgtggtc ccagctactc gagaggctg
//