LOCUS AK299823 1751 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ53516 complete cds.
ACCESSION AK299823
VERSION AK299823.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1751)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1751
/clone="OCBBF3006445"
/clone_lib="OCBBF3"
/db_xref="H-InvDB:HIT000494447"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 45..1529
/codon_start=1
/protein_id="BAG61692.1"
/transl_table=1
/translation="MDQYKFYDPSPPRRRGNWITLKMRKLIKSKKDINRERQKSLTLT
PTRSDSSEGFLQLPHQDSQDSSSVGSNSLEDGQTLGTKKSSMVALKRLPFLRNRPKDK
DKMKACYRRSMSMNDLVQSMVLAGQWTGSTENLEVPDDISTGKRRKELGAMAFSTTAI
NFSTVNSSAGFRSKQLVNNKDTTSFEDISPQGVSDDSSTGSRVHASRPASLDSGRTST
SNSNNNASLHEVKAGAVNNQSRPQSHSSGEFSLLHDHEAWSSSGSSPIQYLKRQTRSS
PVLQHKISETLESRHHKIKTGSPGSEVVTLQQFLEESNKLTSVQIKSSSQENLLDEVM
KSLSVSSDFLGKDKPVSCGLARSVSGKTPGDFYDRRTTKPEFLRPGPRKTEDTYFISS
AGKPTPGTQGKIKLVKESSLSRQSKDSNPYATLPRASSVISTAEGTTRRTSIHDFLTK
DSRLPISVDSPPAAADSNTTAASNVDKVQESRNSKSRSREQQSS"
BASE COUNT 599 a 373 c 364 g 415 t
ORIGIN
1 taaatgaatt aagacgtcag aaggagaaac tagaagagaa aattatggat caatacaaat
61 tttatgaccc atctcctcct agaaggagag gcaactggat tactctaaaa atgagaaaat
121 tgataaagtc taagaaagat attaatcggg aacgccagaa atctctaaca ttaacaccca
181 cccgctcaga ctccagtgaa ggatttcttc agctccctca tcaagacagt caagatagtt
241 cttcagtagg ttcaaactct ttagaagatg gccagacctt ggggaccaag aaaagcagca
301 tggttgcact gaaaagactg ccctttttga ggaacagacc gaaggataaa gacaaaatga
361 aggcctgcta ccgtcgttcc atgtccatga atgacctggt gcagtccatg gtcctagcag
421 gacagtggac aggtagtact gagaatttgg aggttcctga tgatatttca acgggtaaaa
481 ggagaaaaga attgggagct atggccttct ctactacagc catcaacttt tcaactgtca
541 actcttctgc aggcttcaga tccaagcagt tggttaataa taaagatact acatcctttg
601 aagacataag tccacaaggt gttagtgatg attctagtac gggatcaaga gttcatgctt
661 caagaccagc cagccttgat agtggcagaa catccactag caatagcaat aataatgctt
721 cactacatga agtcaaagca ggtgcagtta ataaccaaag caggccacaa agccacagca
781 gtggagaatt tagcctgctt catgaccatg aggcttggtc cagcagtggt agcagtccaa
841 tccagtactt gaaaagacag accagatcaa gcccagtgct ccagcacaaa atatctgaaa
901 cactggagag tcgacatcac aagatcaaaa ctggttcccc tggaagtgaa gttgttactc
961 tacaacagtt tttggaagaa agcaataagc ttacctcagt acagataaag tcctcaagtc
1021 aagagaatct tttagatgaa gtaatgaaaa gtttgtctgt ctcttctgac tttttgggaa
1081 aagacaaacc agttagctgt ggtctggcca ggtcagtaag tggaaaaacc ccaggggact
1141 tctatgatag acggacaact aagcctgagt ttttgagacc tggtcctcga aaaactgaag
1201 atacctactt cattagttct gcgggaaaac ctacaccagg cactcaagga aaaataaaat
1261 tagtaaaaga atcttctctg tcacgacaat caaaagatag taacccttat gcaactttac
1321 ctcgtgcaag cagcgtgatc tcaactgccg aaggaactac acgaaggaca agcatccatg
1381 attttttgac caaggacagt agactgccta tatcagttga ttcaccacca gctgctgctg
1441 acagcaacac cactgcagca tctaatgtgg acaaagtaca agaaagcaga aattcaaaaa
1501 gcaggtctag ggagcaacaa agctcctaat tctattaccc actacatgac atgtgggcca
1561 agtgagagaa aagtgtcctt cagtttctca gtatgaagcc tttatttctg aagtaacaag
1621 acacctagca actataggaa tcatttttaa aaatctttaa ggagactttt aacagtcctt
1681 cgtgaataga gcaggcaaga aatacaaacc ttcattcctt gaatcaagga gcactactgg
1741 attcaactgc c
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