LOCUS AK299812 3066 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ58685 complete cds, highly similar to Homo
sapiens echinoderm microtubule associated protein like 1 (EML1),
transcript variant 1, mRNA.
ACCESSION AK299812
VERSION AK299812.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3066)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3066
/clone="OCBBF3005435"
/clone_lib="OCBBF3"
/db_xref="H-InvDB:HIT000494436"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 442..2853
/codon_start=1
/note="highly similar to Homo sapiens echinoderm
microtubule associated protein like 1 (EML1), transcript
variant 1, mRNA"
/protein_id="BAH13136.1"
/transl_table=1
/translation="MEVTDRIASLEQRVQMQEDDIQLLKSALADVVRRLNITEEQQAV
LNRKGPTKARPLMQTLPLRTTVNNGTVLPKKPTGSLPSPSGVRKETAVPATKRLNRSV
SLLNACKLNRSTPSNIKRTSSSERVSPGGRRESNGDSRGNRNRTGSTSSSSSGKKNSE
SKPKEPVFSAEEGYVKMFLRGRPVTMYMPKDQVDSYSLEAKVELPTKRLKLEWVYGYR
GRDCRNNLYLLPTGETVYFIASVVVLYNVEEQLQRHYAGHNDDVKCLAVHPDRITIAT
GQVAGTSKDGKQLPPHVRIWDSVTLNTLHVIGIGFFDRAVTCIAFSKSNGGTNLCAVD
DSNDHVLSVWDWQKEEKLADVKCSNEAVFAVDFHPTDTNIIVTCGKSHLYFWTLEGSS
LNKKQGLFEKQEKPKFVLCVTFSENGDTITGDSSGNILVWGKGTNRISYAVQGAHEGG
IFALCMLRDGTLVSGGGKDRKLISWSGNYQKLRKTEIPEQFGPIRTVAEGKGDVILIG
TTRNFVLQGTLSGDFTPITQGHTDELWGLAIHASKPQFLTCGHDKHATLWDAVGHRPV
WDKIIEDPAQSSGFHPSGSVVAVGTLTGRWFVFDTETKDLVTVHTDGNEQLSVMRYSP
DGNFLAIGSHDNCIYIYGVSDNGRKYTRVGKCSGHSSFITHLDWSVNSQFLVSNSGDY
EILYWVPSACKQVVSVETTRDIEWATYTCTLGFHVFGVWPEGSDGTDINAVCRAHEKK
LLSTGDDFGKVHLFSYPCSQFRAPSHIYGGHSSHVTNVDFLCEDSHLISTGGKDTSIM
QWRVI"
BASE COUNT 803 a 779 c 794 g 690 t
ORIGIN
1 gcagaactcc caggccacgg agctgatttc actaactgca gccgtccccc tggggcgccc
61 cgtctgccct acttgccatc acccagatgc gcaggatctt gtggcagaaa gcaggagcct
121 ggatgggaag aggagcagcc aggccgaggt gggcgccgct ccccctcccc ggccctgccc
181 aggtcctcag agagctggga cctgagactc attagtgcct gcataatgga tgcctccttc
241 tctcttcttg gaaatcccca gcccatcttg cttaatggcc acgagggaag tgggataccg
301 gcgctctgct cgtaaagccg gcctctgccc cccgcatctc cccttggagg aggggcggct
361 gggcggctta cacaggggag gcctggtctc ttgtcttctg cttcacgacg gctggatgac
421 agcgcttctg ctgcaagtag catggaggtg acagaccgca ttgcttcact ggagcagaga
481 gtccagatgc aagaagacga catccagctg ctcaaatcag ctctagctga tgtggttcgg
541 cggctgaaca ttactgagga acagcaggcc gtgcttaaca ggaaaggacc taccaaagca
601 agaccactga tgcagaccct gcctttaaga accacggtca acaatggcac tgtgttacca
661 aagaaaccta ctggctctct accatccccc tccggggtca ggaaagaaac tgctgtgcca
721 gcaaccaaaa gattaaacag atctgtgagt cttctcaatg cttgcaaact gaatagatcg
781 acaccaagta acatcaagag gaccagctct tctgaacgag tgtctcctgg gggtcgaagg
841 gaaagcaatg gggattccag aggaaaccgg aatcgcacag gctccaccag cagctcttcc
901 agtggcaaaa agaacagtga aagcaaaccc aaggagcctg tattcagtgc agaagaaggc
961 tatgtaaaaa tgtttcttcg tggacgccct gttaccatgt acatgcccaa agatcaagtg
1021 gattcttaca gcttggaagc aaaagtagaa cttccaacca agagactcaa gctggaatgg
1081 gtctatgggt acaggggtcg agactgccgt aacaacctgt acttgcttcc gacgggagag
1141 accgtctact tcatcgcatc cgtggtggtg ttatacaacg tggaggagca actgcagagg
1201 cattacgctg gccacaacga tgacgtgaag tgcctagcag ttcatcctga tcggatcacg
1261 atagcaacag gacaagttgc gggcacatcg aaggatggaa aacaattgcc cccacatgtg
1321 cgcatctggg attccgtgac attgaatact ctccacgtca ttggaatagg tttttttgac
1381 cgagcagtca cctgtattgc attctcaaaa tctaatggag gaaccaatct ctgtgctgtg
1441 gatgactcca acgaccatgt gctctctgta tgggactggc agaaagaaga aaaactagca
1501 gatgtgaagt gctctaatga agctgtgttt gctgtggatt tccaccccac ggacaccaac
1561 atcatagtta cttgtggaaa atcacatctc tacttttgga cactagaagg aagctccctt
1621 aataagaagc aaggattatt cgagaaacaa gaaaagccaa agtttgtcct ctgtgtgact
1681 ttctctgaaa acggtgacac cattactgga gattcaagtg gcaacatctt agtatgggga
1741 aaaggtacaa atcgaataag ctatgcagtt cagggggccc atgagggtgg catttttgca
1801 ctttgtatgt taagagatgg cacactggtg tcgggaggtg ggaaagaccg aaagctcatt
1861 tcttggagcg gaaactatca aaaacttcgt aaaacggaga ttccagaaca gtttggtcca
1921 atacggacag tggccgaggg gaaaggcgat gtgatcttga ttggcacaac tcgaaacttt
1981 gtcctgcagg gcactctgtc aggggacttc acacccatta ctcagggtca cactgatgag
2041 ctctggggac tggccatcca tgcctcaaaa cctcagttct tgacctgtgg gcatgacaag
2101 catgccactc tctgggacgc tgtgggtcac cgtcccgtct gggacaaaat aatagaggat
2161 ccagctcagt cttctggttt tcatccttca gggtctgtgg ttgcagtcgg aacactcact
2221 gggaggtggt ttgtgtttga cacagaaaca aaagacttgg tcaccgttca cacagatgga
2281 aacgaacagc tctctgtaat gcgatactca ccagatggga atttcttagc cataggctca
2341 catgacaact gcatctatat atatggcgtt agtgacaacg ggaggaagta cacgcgagtg
2401 ggcaagtgct cgggtcattc cagcttcatt actcacctgg actggtctgt aaactcacag
2461 ttcctcgtgt caaattccgg agactacgaa atcctctact gggttccctc tgcctgtaag
2521 caagtcgtaa gtgtggaaac tacaagagac attgaatggg ctacctatac ctgcactttg
2581 ggattccatg tttttggagt gtggccagaa ggctcggacg gaaccgacat caatgccgtc
2641 tgtcgggccc atgagaagaa actcctgtca acaggcgacg actttggcaa agtgcacctc
2701 ttctcatacc cctgctcgca gttcagggct ccaagccaca tctacggcgg gcacagcagc
2761 catgtcacca atgtcgattt cctctgtgaa gacagccacc tcatctccac gggcgggaaa
2821 gacacaagca tcatgcagtg gcgcgtcatt tagtacccac cgagagctgt ggggagcagc
2881 atgggcaagg aagacacaga ctcgcattac ccttggtcac tgtgatttct gttttgttta
2941 aaaaaattct tacaaacctc aggaaaactg tgccctccgc cggctacctt agcttagcgt
3001 gtcagcgggc gccacagcgg atcagcggtt ccgtgttcac ttttgttgta caatatatga
3061 cacagt
//