LOCUS AK299774 909 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ57790 complete cds, moderately similar to
Homo sapiens tetratricopeptide repeat domain 21A (TTC21A), mRNA.
ACCESSION AK299774
VERSION AK299774.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 909)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..909
/clone="OCBBF3001139"
/clone_lib="OCBBF3"
/db_xref="H-InvDB:HIT000494398"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 132..497
/codon_start=1
/note="moderately similar to Homo sapiens
tetratricopeptide repeat domain 21A (TTC21A), mRNA"
/protein_id="BAG61657.1"
/transl_table=1
/translation="MIPSQKQLAASICIQFAEHYLAEKEYDKAVQSYKDVFSYLPTDN
KVMLELAQLYLLQGHLDLCEQHCAILLQTEQNHETASVVGSPQHPLPPLPSSLPRVPV
TRCRLLPSPVTSDASLTHL"
BASE COUNT 192 a 273 c 236 g 208 t
ORIGIN
1 attaagaact taggactttc tgtgaactgg tatgtcaggc tctgagtttc tgatcctggc
61 ttgattggtt tctcgaggcc ttggacctcc agtctcggat actgaagcga gttccactgg
121 agcaaccaga aatgattccc tcccagaagc aactggcagc ctctatctgc atccaatttg
181 cagagcacta cctggcagag aaagagtatg acaaggcggt acagtcttat aaggatgtct
241 tctcctactt gccaactgac aataaggtga tgctggagct ggcgcagctc tacctgctcc
301 aggggcacct ggacctgtgt gagcagcact gtgccatcct cctgcagact gagcagaacc
361 atgagaccgc ttctgtggta ggaagccccc agcacccact ccctcccctc ccttcctccc
421 ttcccagggt ccctgtgacc agatgcaggc tacttcctag ccccgtaacc tcagatgcct
481 cactgacaca cctctgagga gctgtcgggc agagaggact cagtgctgca cctactctgc
541 cctttagccg gaagcggtag gctggctggc agtgggcagc atcaatctcc tgggccagtc
601 taaggtgggg tgaggttgat tcaccccagg ggaaagcaca ttcactgtag gtgaaggcaa
661 gggcgggaca ggttcctggg gcttcaggaa aagccctcct cggtcctgcc tctctcttcc
721 ctatcatcca gacctcctct agggctggcc caggagcaga agctgagccc ttgcagagca
781 aggaggggtc ctcatcccta cctctattgc ctggcagttc tcagagtggg tggagaggct
841 tcccctgtag gctgtcaaaa agccccactg gtctctacca ctagtcttac cttcccatgt
901 acatcctca
//