LOCUS AK299773 1751 bp mRNA linear HUM 31-JUL-2008
DEFINITION Homo sapiens cDNA FLJ52238 complete cds, highly similar to Protein
phosphatase 2C isoform delta (EC 3.1.3.16).
ACCESSION AK299773
VERSION AK299773.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1751)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1751
/clone="OCBBF3000999"
/clone_lib="OCBBF3"
/db_xref="H-InvDB:HIT000494397"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 398..1234
/codon_start=1
/note="highly similar to Protein phosphatase 2C isoform
delta (EC 3.1.3.16)"
/protein_id="BAG61656.1"
/transl_table=1
/translation="MWKKLAEWPKTMTGLPSTSGTTASVVIIRGMKMYVAHVGDSGVV
LGIQDDPKDDFVRAVEVTQDHKPELPKERERIEGLGGSVMNKSGVNRVVWKRPRLTHN
GPVRRSTVIDQIPFLAVARALGDLWSYDFFSGEFVVSPEPDTSVHTLDPQKHKYIILG
SDGLWNMIPPQDAISMCQDQEEKKYLMGEHGQSCAKMLVNRALGRWRQRMLRADNTSA
IVICISPEVDNQGNFTNEDELYLNLTDSPSYNSQETCVMTPSPCSTPPVKDFGFELDS
RK"
BASE COUNT 469 a 423 c 452 g 407 t
ORIGIN
1 gtgcgcaggc gcaactgcct ggctctgctc gctccggcgc tccggcccag ctctcgcgga
61 caagtccaga catcgcgcgc ccccccttct ccgggtccgc cccctccccc ttctcggcgt
121 cgtcgaagat aaacaatagt tggccggcga gcgcctagtg tgtctcccgc cgccggattc
181 ggcgggctgc gtgggaccgg cgggatcccg gccagccggc catggcgggg ctgtactcgc
241 tgggagtgag cgtcttctcc gaccagggcg ggaggcggca cagtttgccc gggagcactt
301 gtggggtttc atcaagaagc agaagggttt cacctcgtcc gagccggcta aggtttgcgc
361 tgccatccgc aaaggctttc tcgcttgtca ccttgccatg tggaagaaac tggcggaatg
421 gccaaagact atgacgggtc ttcctagcac atcagggaca actgccagtg tggtcatcat
481 tcggggcatg aagatgtatg tagctcacgt aggtgactca ggggtggttc ttggaattca
541 ggatgacccg aaggatgact ttgtcagagc tgtggaggtg acacaggacc ataagccaga
601 acttcccaag gaaagagaac gaatcgaagg acttggtggg agtgtaatga acaagtctgg
661 ggtgaatcgt gtagtttgga aacgacctcg actcactcac aatggacctg ttagaaggag
721 cacagttatt gaccagattc cttttctggc agtagcaaga gcacttggtg atttgtggag
781 ctatgatttc ttcagtggtg aatttgtggt gtcacctgaa ccagacacaa gtgtccacac
841 tcttgaccct cagaagcaca agtatattat attggggagt gatggacttt ggaatatgat
901 tccaccacaa gatgccatct caatgtgcca ggaccaagag gagaaaaaat acctgatggg
961 tgagcatgga caatcttgtg ccaaaatgct tgtgaatcga gcattgggcc gctggaggca
1021 gcgtatgctc cgagcagata acactagtgc catagtaatc tgcatctctc cagaagtgga
1081 caatcaggga aactttacca atgaagatga gttatacctg aacctgactg acagcccttc
1141 ctataatagt caagaaacct gtgtgatgac tccttcccca tgttctacac caccagtcaa
1201 ggattttgga tttgaactcg attcaagaaa gtgatgtaac ttattatcag agagccatct
1261 ttacatcaat actaatctga atgccagcca tgtgtacagc actaataaaa agtcactgga
1321 ggaggatcca tggccaaggg tgaattctaa ggaccatata cctgccctgg ttcgtagcaa
1381 tgccttctca gagaattttt tagaggtttc agctgagata gttcgagaga atgtccaagg
1441 tgtagtcata ccctcaaaag atccagaacc acttgaagaa aattgcgcta aagccctgac
1501 tttaaggata catgattctt tgaataatag ccttccaatt ggccttgtgc ctactaattc
1561 aacaaacact gtcatggacc aaaaaaattt gaagatgtca actcctggcc aaatgaaagc
1621 ccaagaaatt gaaagaaccc ctccaacaaa ctttaaaagg acattagaag agtccaattc
1681 tggccccctg atgaagaagc atagacgaaa tggcttaagt cgaagtagtg gtgctcagcc
1741 tgcaagtctc c
//