LOCUS AK299769 1920 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ53383 complete cds, highly similar to Homo
sapiens armadillo repeat containing 8 (ARMC8), transcript variant
2, mRNA.
ACCESSION AK299769
VERSION AK299769.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1920)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1920
/clone="OCBBF3000815"
/clone_lib="OCBBF3"
/db_xref="H-InvDB:HIT000494393"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 77..1879
/codon_start=1
/note="highly similar to Homo sapiens armadillo repeat
containing 8 (ARMC8), transcript variant 2, mRNA"
/protein_id="BAH13123.1"
/transl_table=1
/translation="MKNAVIGNNKQKANLIVLGAVPRLLYLLQQETSSTELKTECAVV
LGSLAMGTENNVKSLLDCHIIPALLQGLLSPDLKFIEACLRCLRTIFTSPVTPEELLY
TGPDHQTILFNHGAVQNIAHLLTSLSYKVRMQALKCFSVLAFENPQVSMTLVNVLVDG
ELLPQIFVKMLQRDKPIEMQLTSAKCLTYMCRAGAIRTDDNCIVLKTLPCLVRMCSKE
RLLEERVEGAETLAYLIEPDVELQRIASITDHLIAMLADYFKYPSSVSAITDIKRLDH
DLKHAHELRQAAFKLYASLGANDEDIRKKIIETENMMDRIVTGLSESSVKVRLAAVRC
LHSLSRSVQQLRTSFQDHAVWKPLMKVLQNAPDEILVVASSMLCNLLLEFSPSKEPIL
ESGAVELLCGLTQSENPALRVNGIWALMNMAFQAEQKIKADILRSLSTEQLFRLLSDS
DLNVLMKTLGLLRNLLSTRPHIDKIMSTHGKQIMQAVTLILEGEHNIEVKEQTLCILA
NIADGTTAKDLIMTNDDILQKIKYYMGHSHVKLQLAAMFCISNLIWNEEEGSQERQDK
LRDMGIVDILHKLSQSPDSNLCDKAKMALQQYLA"
BASE COUNT 574 a 394 c 428 g 524 t
ORIGIN
1 tgcagcagcc gggtgggaag gctcaagatg gcgtgcttgt tggagacccc aatccgcatg
61 agcgtccttt cgagacatga aaaatgctgt aattggaaac aacaagcaga aagccaatct
121 cattgtttta ggagctgttc caagattgtt gtacttgctt cagcaagaaa cctcaagcac
181 agagctgaaa actgaatgtg cagtggtgtt gggaagtctt gctatgggta ctgaaaacaa
241 tgtcaagtct ctactggact gccatattat ccctgcctta ttgcaaggac tactgtcccc
301 agacctgaag tttattgaag cttgcctccg atgcctgcgt accatcttca ccagtcctgt
361 cactccagag gagctactgt atacagggcc agatcatcaa acaattttat ttaaccacgg
421 tgcagttcag aatattgctc acctactaac ctcactgtcc tacaaagttc gaatgcaagc
481 actgaaatgt ttctcagttt tagcttttga aaacccccag gtatcgatga ccctggtaaa
541 tgttttggtt gatggagaat tgttaccaca gatttttgtg aagatgttac agagggataa
601 gcctattgag atgcagctca catcagcaaa atgtttaact tacatgtgta gagctggagc
661 aattcggaca gatgataact gtattgtatt aaagacatta ccttgtttgg ttcgaatgtg
721 cagtaaggag agattactag aggagagagt tgaaggagct gagacacttg cctatctgat
781 tgaaccagat gttgagctac agagaatcgc tagcataact gatcacctca ttgccatgct
841 tgctgattat ttcaagtatc ccagctcagt gagtgccatc actgatatta aaaggcttga
901 tcatgattta aaacatgctc acgaactccg ccaggctgca ttcaagctct atgcctctct
961 tggagcaaat gatgaagaca tccggaagaa gatcattgag actgaaaata tgatggaccg
1021 aattgtgact ggcttgtctg agtctagtgt caaggtgcgg ttagctgccg tcagatgttt
1081 gcacagttta tccagatctg tgcagcagct tcgaaccagt ttccaggatc atgctgtttg
1141 gaaaccttta atgaaggttt tacaaaatgc accagatgaa atcctagtgg tagcatcttc
1201 catgctgtgt aatcttcttc ttgaattttc tccaagcaaa gagccaattt tggaatcagg
1261 agccgtagag ctactttgtg gattaactca gagtgaaaat cctgctttac gagtgaatgg
1321 aatttgggct ttaatgaata tggcatttca ggctgaacaa aaaataaaag cagatatttt
1381 acgaagcttg agtactgaac agctattccg gttattatca gattcagatt tgaatgtgct
1441 gatgaagaca ttgggacttc ttagaaatct cctctccact cgtcctcata tagataaaat
1501 aatgagtact catggaaagc aaattatgca agccgtcact cttattctag aaggggaaca
1561 taacattgag gtcaaagagc agacactgtg catcttagcc aacatagcgg atgggacaac
1621 agcaaaagat cttattatga ccaatgatga tatcctacag aaaatcaagt attacatggg
1681 ccattcacat gttaaactgc agcttgcagc catgttttgt atatcaaacc tcatatggaa
1741 tgaagaggaa ggttcacaag aacgccagga taaattacga gacatgggca tcgtagatat
1801 tctacacaaa ctgagtcagt caccagattc aaacctttgt gacaaggcaa agatggcact
1861 gcagcagtac ctggcatgat gggagtgccc ctgggcacct gcgagcatcc cacctccttg
//