LOCUS AK299765 1186 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ57888 complete cds, highly similar to
Beta-sarcoglycan.
ACCESSION AK299765
VERSION AK299765.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1186)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1186
/clone="OCBBF3000603"
/clone_lib="OCBBF3"
/db_xref="H-InvDB:HIT000494389"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 13..759
/codon_start=1
/note="highly similar to Beta-sarcoglycan"
/protein_id="BAH13121.1"
/transl_table=1
/translation="MAAAAAAAAEQITLVIWAVIRIGPNGCDSMEFHESGLLRFKQVS
DMGVIHPLYKSTVGGRRNENLVITGNNQPIVFQQGTTKLSVENNKTSITSDIGMQFFD
PRTQNILFSTDYETHEFHLPSGVKSLNVQKASTERITSNATSDLNIKVDGRAIVRGNE
GVFIMGKTIEFHMGGNMELKAENSIILNGSVMVSTTRLPSSSSGDQLGSGDWVRYKLC
MCADGTLFKVQVTSQNMGCQISDNPCGNTH"
BASE COUNT 364 a 220 c 258 g 344 t
ORIGIN
1 gggcgcggga agatggcggc agcggcggcg gcggctgcag aacagataac acttgttatt
61 tgggccgtga ttcgcattgg accaaatggc tgtgatagta tggagtttca tgaaagtggc
121 ctgcttcgat ttaagcaagt atctgacatg ggagtgatcc accctcttta taaaagcaca
181 gtaggaggaa ggcgaaatga aaatttggtc atcactggca acaaccagcc tattgttttt
241 cagcaaggga caacaaagct cagtgtagaa aacaacaaaa cttctattac aagtgacatc
301 ggcatgcagt tttttgaccc gaggactcaa aatatcttat tcagcacaga ctatgaaact
361 catgagtttc atttgccaag tggagtgaaa agtttgaatg ttcaaaaggc atctactgaa
421 aggattacca gcaatgctac cagtgattta aatataaaag ttgatgggcg tgctattgtg
481 cgtggaaatg aaggtgtatt cattatgggc aaaaccattg aatttcacat gggtggtaat
541 atggagttaa aggcggaaaa cagtatcatc ctaaatggat ctgtgatggt cagcaccacc
601 cgcctaccca gttcctccag tggagaccag ttgggtagtg gtgactgggt acgctacaag
661 ctctgcatgt gtgctgatgg gacgctcttc aaggtgcaag taaccagcca gaacatgggc
721 tgccaaatct cagacaaccc ctgtggaaac actcattaaa agaaccccag aggtcaccaa
781 catgtttata tcttgacttg acttttttat gcatgcaaat cattgttttt acagagtttg
841 tgataactca taattatttt aatggcagag cactgctgta tctgttttat ggtctacata
901 gttaaaatct tctcagagag cctaaattct aatacatttt attaatttat actaatcttc
961 atatttactg ttctctaaaa taattatgag aagcaaataa aatcaaaagt catgtttaaa
1021 gacgtgtttt taaaattcca ctatcccttt tctaaaggtt aaaggtctga agcagctgtt
1081 tagattcact gtaagtaaac tttggtaact ctaatgggga tagacccact taagatattt
1141 aaaaaggtat ggcatcagcg tttcatgctc tgccttttag cttcta
//