LOCUS AK299754 2839 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ58105 complete cds, highly similar to Homo
sapiens radial spokehead-like 3 (RSHL3), mRNA.
ACCESSION AK299754
VERSION AK299754.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2839)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2839
/clone="OCBBF2037595"
/clone_lib="OCBBF2"
/db_xref="H-InvDB:HIT000494378"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 146..2296
/codon_start=1
/note="highly similar to Homo sapiens radial
spokehead-like 3 (RSHL3), mRNA"
/protein_id="BAG61643.1"
/transl_table=1
/translation="MEDSTSPKQEKENQEELGETRRPWEGKTAASPQYSEPESSEPLE
AKQGPETGRQSRSSRPWSPQSRAKTPLGGPAGPETSSPAPVSPREPSSSPSPLAPARQ
DLAAPPQSDRTTSVIPEAGTPYPDPLEQSSDKRESTPHHTSQSEGNTFQQSQQPKPHL
CGRRDVSYNNAKQKELRFDVFQEEDSNSDYDLQQPAPGGSEVAPSMLEITIQNAKAYL
LKTSSNSGFNLYDHLSNMLTKILNERPENAVDIFENISQDVKMAHFSKKFDALQNENE
LLPTYEIAEKQKALFLQGHLEGVDQELEDEIAENALPNVMESAFYFEQAGVGLGTDET
YRIFLALKQLTDTHPIQRCRFWGKILGLEMNYIVAEVEFREGEDEEEVEEEDVAEERD
NGESEAHEDEEDELPKSFYKAPQAIPKEESRTGANKYVYFVCNEPGRPWVKLPPVIPA
QIVIARKIKKFFTGRLDAPIISYPPFPGNESNYLRAQIARISAGTHVSPLGFYQFGEE
EGEEEEEAEGGRNSFEENPDFEGIQVIDLVESLSNWVHHVQHILSQGRCNWFNSIQKN
EEEEEEEDEEKDDSDYIEQEVGPPLLTPISEDLEIQNIPPWTTRLSSNLIPQYAIAVL
QSNLWPGAYAFSNGKKFENFYIGWGHKYSPDNYTPPVPPPVYQEYPSGPEITEMDDPS
VEEEQAFRAAQEAVLLAAENEESEEDEDEEDDYD"
BASE COUNT 924 a 587 c 628 g 700 t
ORIGIN
1 atggagatag gacgcagcaa ctcacagagc aaccaggacc cagaaatcgc ttaagagacc
61 gcggcaaagt aacttaactg agttgccttc ttccatattt tcacgcccct ttcatccaga
121 acattttttt tcttgaactg cttccatgga ggactcaacc tccccgaagc aagaaaaaga
181 aaaccaagaa gaactagggg aaacaaggcg gccatgggaa ggaaagacag cagcttctcc
241 ccaatattct gagcctgagt cgtctgagcc cttggaggcg aagcaggggc cagaaactgg
301 acgccagtcc cgaagcagcc gtccttggag cccgcagtct agagccaaga cgcctctggg
361 tggccccgcg ggaccagaaa catcatcacc tgctcctgtc tctccgcggg agccctcttc
421 ctctccttct cccctggctc cggccagaca agacctcgcg gcaccacctc agtcggacag
481 gaccacgagt gtgattcctg aagctgggac accttatcct gatcctttgg aacaatcatc
541 tgataaaaga gaatcaactc ctcatcacac aagccagtca gaaggaaaca cctttcaaca
601 gtctcagcaa cccaaacccc acctgtgtgg acgaagggac gtgagctata acaacgctaa
661 acagaaagag ctgagatttg acgtttttca ggaggaagac tcaaacagtg actatgattt
721 acagcagccg gcgcctgggg gctctgaagt ggcccccagc atgcttgaga tcaccattca
781 gaatgctaag gcttacctgc tgaagactag cagcaattcg ggctttaatc tatatgatca
841 tctttctaat atgttgacca agatattaaa tgagcgtcct gaaaatgctg ttgacatctt
901 tgaaaatatt agccaagatg tgaagatggc acattttagt aaaaaatttg atgcactaca
961 aaatgagaat gagttgcttc caacatatga aatagcagaa aagcaaaagg ctctttttct
1021 ccagggacat ttggaaggag ttgaccaaga attggaagat gaaatagcag aaaacgctct
1081 tccaaatgta atggagtcag ctttttattt tgaacaagct ggagttggtt tgggcacaga
1141 tgagacatac cgcatatttc ttgccctcaa gcagcttact gatacccacc caatccaaag
1201 atgccgcttc tggggaaaga tcttgggtct ggaaatgaat tatattgtag ctgaagtgga
1261 atttcgtgag ggggaagatg aagaggaagt ggaagaggaa gatgtagctg aagagaggga
1321 caatggagaa agtgaagctc atgaagatga ggaagatgaa ttaccaaagt ccttttacaa
1381 ggccccacag gctataccaa aagaagaaag tagaacaggt gccaacaaat atgtctattt
1441 tgtttgcaat gaaccaggaa gaccatgggt gaagttacca ccagttatac ctgcacaaat
1501 tgttattgca agaaaaatca agaaattttt cactgggcga ttggatgctc ccatcataag
1561 ctacccacct ttcccaggaa atgagagtaa ttatttacga gcacaaattg cccgaatttc
1621 agcaggaacc cacgtcagtc ctctaggatt ttatcagttt ggtgaagagg aaggagagga
1681 ggaggaagag gcagaaggtg ggcgaaatag ctttgaggaa aaccctgatt ttgaaggcat
1741 ccaagtgatt gatctagtag aatccctatc caattgggtt catcatgtac agcatattct
1801 ctctcagggt cgctgtaatt ggttcaactc catacaaaaa aatgaggaag aagaagagga
1861 agaagatgaa gaaaaagacg attctgacta catagaacag gaagtggggc ctcctctttt
1921 gacaccaatc tctgaagatt tagagattca gaatataccc ccctggacaa cacggttatc
1981 ctcaaatctc attccacaat atgctattgc agtccttcaa tccaaccttt ggcctggagc
2041 atatgccttc tccaatggca aaaagtttga aaatttctac ataggctggg gtcataagta
2101 tagtccagac aattatacac ccccagttcc accaccagtt tatcaagaat accccagtgg
2161 accagaaatt acagaaatgg atgatcctag tgtggaggag gagcaggctt tcagggctgc
2221 acaagaagca gttctactcg cagctgagaa tgaagaatct gaggaagatg aagatgagga
2281 agatgattat gactaataaa cataaaatta gcctggtttt atgtgacact gatacacaca
2341 caccccttat atgggactaa ttttacactt ttctgtgtta tgtgtgtata tacatacaca
2401 tgtaagaaat tattcaactg caaaatctca atcttgaaaa tcaagcttga aatttcatag
2461 gtagaaatat tagcattttt attgaaagat actcacagga ttttccagag gctaaataac
2521 atgcaattgc ataattgttc tgagggttat ggataatgga atatgtgttt gtacattcct
2581 gtttttaaaa gggctcaggt ttcacatggc ccaggtgagg taaaacaatt aaaataaata
2641 aataaatggt ctcaggttta atttgtaata cgacaaacac tggaagatat aacccacagg
2701 aaattcttgg aaacatcaat actttttaaa gagtgtcaag gggtatgaag acaaaaaata
2761 ttgatagtca ctagagtaat gtattcttaa cctttgtaag aactgatctc agcatgtatt
2821 cttaaacctt tgtaattac
//