LOCUS AK299709 1654 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ55589 complete cds, highly similar to
LIM/homeobox protein Lhx6.1.
ACCESSION AK299709
VERSION AK299709.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1654)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1654
/clone="OCBBF2031617"
/clone_lib="OCBBF2"
/db_xref="H-InvDB:HIT000494333"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 107..1285
/codon_start=1
/note="highly similar to LIM/homeobox protein Lhx6.1"
/protein_id="BAH13108.1"
/transl_table=1
/translation="MYWKHENAAPALPEGCRLPAEGGPATDQVMAQPGSGCKATTRCL
EGTAPPAMAQSDAEALAGALDKDEGQASPCTPSTPSVCSPPSAASSVPSAGKNICSSC
GLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSCYIKNKEIFCKMDYFSRFGTKC
ARCGRQIYASDWVRRARGNAYHLACFACFSCKRQLSTGEEFGLVEEKVLCRIHYDTMI
ENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQ
TLQKLADMTGLSRRVIQVWFQNCRARHKKHTPQHPVPPSGAPPSRLPSALSDDIHYTP
FSSPERARMVTLHGYIESQVQCGQVHCRLPYTAPPVHLKADMDGPLSNRGEKVILFQY
"
BASE COUNT 314 a 592 c 462 g 286 t
ORIGIN
1 tctctcctcc tgctcctgca gcagcctctg ctcccactgc ggctgtggtc cccctcggcg
61 cagctctccg cgctgcgcgc ccgctgagcc cgaggttccc cggcccatgt actggaagca
121 tgagaacgcc gccccggcgt tgcccgaggg ctgccggctg ccggccgagg gcggccccgc
181 caccgaccag gtgatggccc agccagggtc cggctgcaaa gcgaccaccc gctgtcttga
241 agggaccgcg ccgcccgcca tggctcagtc tgacgccgag gccctggcag gagctctgga
301 caaggacgag ggtcaggcct ccccatgtac gcccagcacg ccatctgtct gctcaccgcc
361 ctctgccgcc tcctccgtgc cgtctgcagg caagaacatc tgctccagct gcggcctcga
421 gatcctggac cgatatctgc tcaaggtcaa caacctcatc tggcacgtgc ggtgcctcga
481 gtgctccgtg tgtcgcacgt cgctgaggca gcagaacagc tgctacatca agaacaagga
541 gatcttctgc aagatggact acttcagccg attcgggacc aagtgtgccc ggtgcggccg
601 acagatctac gccagcgact gggtgcggag agctcgcggc aacgcctacc acctggcctg
661 cttcgcctgc ttctcgtgca agcgccagct gtccactggt gaggagttcg gcctggtcga
721 ggagaaggtg ctctgccgca tccactacga caccatgatt gagaacctca agagggccgc
781 cgagaacggg aacggcctca cgttggaggg ggcagtgccc tcggaacagg acagtcaacc
841 caagccggcc aagcgcgcgc ggacgtcctt caccgcggaa cagctgcagg ttatgcaggc
901 gcagttcgcg caggacaaca accccgacgc tcagacgctg cagaagctgg cggacatgac
961 gggcctcagc cggagagtca tccaggtgtg gtttcaaaac tgccgggcgc gtcataaaaa
1021 gcacacgccg caacacccag tgccgccctc gggggcgccc ccgtcccgcc ttccctccgc
1081 cctgtccgac gacatccact acaccccgtt cagcagcccc gagcgggcgc gcatggtcac
1141 cctgcacggc tacattgaga gtcaggtaca gtgcgggcag gtgcactgcc ggctgcctta
1201 caccgcaccc cccgtccacc tcaaagccga tatggatggg ccgctctcca accggggtga
1261 gaaggtcatc ctttttcagt actaacgctg ccggcacttc cgcatctgcc cgtgggcgcc
1321 ccacagctgc ccctcagccg ctgagatcca gtgtccaagc tgcggccagg agtccaccca
1381 cctccgcatc cacccccgtc cgccatcctg cccaccacca ggtcggttcc cgaggcctgg
1441 cctttccctc tcctgctgag aaccagaacc caccaggagc accacagatt cctcctcttg
1501 gaaggcagaa ctccctgaaa tctggaatca gggtggaaac agcctgtttt tcccatttaa
1561 acaggagtcc tcttcaactt cagctgatta caataacaaa aggcggaatt gaattgtgcg
1621 atgccaacgg ccttctcatt tacaggtttt tttc
//