LOCUS AK299683 2762 bp mRNA linear HUM 31-JUL-2008
DEFINITION Homo sapiens cDNA FLJ53181 partial cds, highly similar to Probable
global transcription activator SNF2L2 (EC 3.6.1.-).
ACCESSION AK299683
VERSION AK299683.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2762)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2762
/clone="OCBBF2027152"
/clone_lib="OCBBF2"
/db_xref="H-InvDB:HIT000494307"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 618..>2762
/codon_start=1
/note="highly similar to Probable global transcription
activator SNF2L2 (EC 3.6.1.-)"
/protein_id="BAG61590.1"
/transl_table=1
/translation="MVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLI
IVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKD
KHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWAL
LNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKK
EVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIM
QLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHR
VLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLST
RAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKI
LAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQM
IARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEVGRLTCEEEE
EKIFGRGSRQRRDVDYSDALTEKQWLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDPAK
EDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDRCNVEKVPSNSQLEIEG
NSSGRQLSEVFIQLPSRKELPEYYELIRKPVDF"
BASE COUNT 792 a 662 c 694 g 614 t
ORIGIN
1 atattcataa tctagtcctc tctccctctg tttctgtact ctgggtgact cagagaggga
61 agagattcag ccagcacact cctcgcgagc aagcattact ctactgactg gcagagacag
121 gagaggtaga tgtccacgcc cacagaccct ggtgcgatgc cccacccagg gccttcgccg
181 gggcctgggc cttcccctgg gccaattctt gggcctagtc caggaccagg accatcccca
241 ggttccgtcc acagcatgat ggggccaagt cctggacctc caagtgtctc ccatcctatg
301 ccgacgatgg ggtccacaga cttcccacag gagggcatgc atcaaatgca taagcccatc
361 gatggtatac atgacaaggg gattgtagaa gacatccatt gtggatccat gaagggcact
421 ggtatgcgac cacctcaccc aggcatgggc cctccccaga gtccaatgga tcaacacagc
481 caaggttata tgtcaccaca cccatctccc agtcctacta caccgtggct catgccatct
541 cggagagggt ggagaaacag tctgccctcc taattaatgg gaccctaaag cattaccagc
601 tccagggcct ggaatggatg gtttccctgt ataataacaa cttgaacgga atcttagccg
661 atgaaatggg gcttggaaag accatacaga ccattgcact catcacttat ctgatggagc
721 acaaaagact caatggcccc tatctcatca ttgttcccct ttcgactcta tctaactgga
781 catatgaatt tgacaaatgg gctccttctg tggtgaagat ttcttacaag ggtactcctg
841 ccatgcgtcg ctcccttgtc ccccagctac ggagtggcaa attcaatgtc ctcttgacta
901 cttatgagta tattataaaa gacaagcaca ttcttgcaaa gattcggtgg aaatacatga
961 tagtggacga aggccaccga atgaagaatc accactgcaa gctgactcag gtcttgaaca
1021 ctcactatgt ggcccccaga aggatcctct tgactgggac cccgctgcag aataagctcc
1081 ctgaactctg ggccctcctc aacttcctcc tcccaacaat ttttaagagc tgcagcacat
1141 ttgaacaatg gttcaatgct ccatttgcca tgactggtga aagggtggac ttaaatgaag
1201 aagaaactat attgatcatc aggcgtctac ataaggtgtt aagaccattt ttactaagga
1261 gactgaagaa agaagttgaa tcccagcttc ccgaaaaagt ggaatatgtg atcaagtgtg
1321 acatgtcagc tctgcagaag attctgtatc gccatatgca agccaagggg atccttctca
1381 cagatggttc tgagaaagat aagaagggga aaggaggtgc taagacactt atgaacacta
1441 ttatgcagtt gagaaaaatc tgcaaccacc catatatgtt tcagcacatt gaggaatcct
1501 ttgctgaaca cctaggctat tcaaatgggg tcatcaatgg ggctgaactg tatcgggcct
1561 cagggaagtt tgagctgctt gatcgtattc tgccaaaatt gagagcgact aatcaccgag
1621 tgctgctttt ctgccagatg acatctctca tgaccatcat ggaggattat tttgcttttc
1681 ggaacttcct ttacctacgc cttgatggca ccaccaagtc tgaagatcgt gctgctttgc
1741 tgaagaaatt caatgaacct ggatcccagt atttcatttt cttgctgagc acaagagctg
1801 gtggcctggg cttaaatctt caggcagctg atacagtggt catctttgac agcgactgga
1861 atcctcatca ggatctgcag gcccaagacc gagctcaccg catcgggcag cagaacgagg
1921 tccgggtact gaggctctgt accgtgaaca gcgtggagga aaagatcctc gcggccgcaa
1981 aatacaagct gaacgtggat cagaaagtga tccaggcggg catgtttgac caaaagtctt
2041 caagccacga gcggagggca ttcctgcagg ccatcttgga gcatgaggag gaaaatgagg
2101 aagaagatga agtaccggac gatgagactc tgaaccaaat gattgctcga cgagaagaag
2161 aatttgacct ttttatgcgg atggacatgg accggcggag ggaagatgcc cggaacccga
2221 aacggaagcc ccgtttaatg gaggaggatg agctgccctc ctggatcatt aaggatgacg
2281 ctgaagtagg aaggctcacc tgtgaagaag aggaggagaa aatatttggg agggggtccc
2341 gccagcgccg tgacgtggac tacagtgacg ccctcacgga gaagcagtgg ctaagggcca
2401 tcgaagacgg caatttggag gaaatggaag aggaagtacg gcttaagaag cgaaaaagac
2461 gaagaaatgt ggataaagat cctgcaaaag aagatgtgga aaaagctaag aagagaagag
2521 gccgccctcc cgctgagaaa ctgtcaccaa atccccccaa actgacaaag cagatgaacg
2581 ctatcatcga tactgtgata aactacaaag ataggtgtaa cgtggagaag gtgcccagta
2641 attctcagtt ggaaatagaa ggaaacagtt cagggcgaca gctcagtgaa gtcttcattc
2701 agttaccttc aaggaaagaa ttaccagaat actatgaatt aattaggaag ccagtggatt
2761 tc
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