LOCUS AK299680 2030 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ55588 complete cds, moderately similar to
Zinc finger protein 418.
ACCESSION AK299680
VERSION AK299680.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2030)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2030
/clone="OCBBF2026445"
/clone_lib="OCBBF2"
/db_xref="H-InvDB:HIT000494304"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 264..1820
/codon_start=1
/note="moderately similar to Zinc finger protein 418"
/protein_id="BAG61588.1"
/transl_table=1
/translation="MAAAALRPPAQGTVTFEDVAVNFSQEEWSLLSEAQRCLYHDVML
ENLTLISSLGCWYGAKDETPSKQTLSIQQESPLRTHWTGVCTKKVHLWGMCGPLLGDI
LHQGTQHNQKLNGFGAYEKKLDDDANHHQDQKQHIGEKSYRSNAKGTSFVKNCKFHMS
HEPFIFHEVGKDFLSSLRLLQQEDIHTSGKSNFETKHGIPLQGGKTHYICGESTIPFS
NKHSLVLHQRLLPREGPYVCSDSGKFTSKSNSFNNHQGVRTGKRPYQCGQCDESFWYK
AHLTEHQRVHTGERPYECGECDKSFSHKHSLVDHQRVHTGERPYECDECGKSFSHKRS
LVHHQRVHTGERPYQCGECGKSFNHKCNLIQHQRVHTGERPFECTACGKLFRSSSHLK
EHQRVHTGERPYECKECRKSFRYKSHLTEHQRVHTGERPYECRECGKCFHQKGSLIQH
QQIHSGERPHECGECGKCFHQKGSLIRHQQIHSGERPHECGECGKCFRQKGNLIKHQR
VHTGERHHEC"
BASE COUNT 611 a 437 c 499 g 483 t
ORIGIN
1 acttccggcg tcctctacta gtggccattt tgattggtgt tgggtgtatt ttccagtgag
61 agaccgcgga gtgttgggtc gtgtagaagt gactgaaccc agaaggtgga gacgagacgt
121 tgtcccgact gcacagaggc tgctctgcag ctccttaaag gcgctaggcg tgacccgcac
181 caaggccggg atcgggacca ccgtgcccgg gtacctgcac tgctcgcccc ctcctttcga
241 ccccgctttc cccacccagt cggatggcgg cggccgcgct gaggcccccg gctcagggca
301 ctgtgacctt tgaagatgtg gctgtgaact tttcccagga ggaatggagt ctccttagtg
361 aggctcagag atgcctttat catgacgtga tgctggagaa cctgacactt atatcttctc
421 taggttgttg gtatggagca aaagacgaga caccttctaa gcagaccctt tctatacaac
481 aggagtcccc actcaggaca cattggacag gtgtatgtac caagaaggtc cacctctggg
541 gaatgtgtgg ccctctcctg ggagatatct tacaccaggg aacacaacac aatcagaaat
601 tgaatgggtt tggggcatat gaaaaaaaat tggatgacga tgcaaaccat catcaagacc
661 agaagcagca cattggagag aaatcgtaca gaagcaatgc caagggaaca tcttttgtaa
721 agaactgtaa attccatatg tcacatgagc catttatctt tcatgaggtt gggaaagact
781 ttttgtccag cttgagatta ctccaacaag aggacattca cacttcaggg aagtcaaact
841 ttgaaactaa gcatgggata ccccttcagg gtggaaaaac tcattacatc tgtggagagt
901 ccacaatacc gtttagcaac aaacactcac ttgtccttca ccagagactt ctccctagag
961 aaggacctta tgtatgcagt gattctggga aattcactag caaaagtaat agttttaata
1021 atcatcaggg agttcgcact ggaaaaagac cttatcagtg tggacaatgt gatgaatcat
1081 tttggtataa ggcccacctc actgaacacc agagagttca cactggagaa agaccttatg
1141 agtgtggaga atgtgataaa tcttttagtc ataagcacag tcttgttgac catcagcgag
1201 ttcacactgg agaaagacct tatgaatgtg acgaatgtgg gaaatctttt agccataagc
1261 gcagccttgt tcaccaccag cgagttcaca ctggagaaag accttatcag tgtggagaat
1321 gtgggaaatc gtttaatcac aagtgcaacc tcattcagca tcagcgagtt cacactggag
1381 aaagaccttt tgagtgtacg gcatgtggga agttatttag gagcagctcc cacctaaagg
1441 aacaccagag agttcacact ggagaaagac cctatgagtg taaagaatgt aggaaatcat
1501 ttaggtacaa gtcacacctc actgaacacc agagagttca cactggagaa aggccatatg
1561 agtgtagaga atgtgggaaa tgttttcatc aaaagggcag tctcattcaa catcagcaga
1621 tccactctgg agaaaggcca catgagtgtg gagaatgtgg gaaatgtttt catcaaaagg
1681 gcagtctcat tcgacatcag cagattcact ctggagaaag gccacatgag tgtggagaat
1741 gtggaaagtg ttttcgtcaa aagggaaacc tcattaaaca tcaacgagtt cacacgggag
1801 aaagacatca tgaatgttga aaatttggca gatctgttgg taaaaagagc accctcattc
1861 aacattcgtg agatcacact ggaaagcact tatgagtatg gagaatgtgc aaaatcatct
1921 agccaaaagg ttggcctcat tcaacaatag caagattaca ctggggaaag gctttctgag
1981 tgtagagaat gtatgaaatc ctgtacatag aagttttgcc tcaccaaata
//