LOCUS AK299667 2537 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ51069 complete cds, highly similar to DNA
mismatch repair protein Msh2.
ACCESSION AK299667
VERSION AK299667.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2537)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2537
/clone="OCBBF2023859"
/clone_lib="OCBBF2"
/db_xref="H-InvDB:HIT000494291"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 103..2265
/codon_start=1
/note="highly similar to DNA mismatch repair protein Msh2"
/protein_id="BAG61581.1"
/transl_table=1
/translation="MIGIWHIRLLLAISLSLKTFSLVTMICQLPLVLWVLKCPQLMAR
DMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLKGKKGEQMNSAVLPEMENQGS
VEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQ
TLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLL
LAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEK
KMQSTLISAARDLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNG
VKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVV
SFAHVSNGAPVPYVRPAILEKGQGRIILKASRHACVEVQDEIAFIPNDVYFEKDKQMF
HIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGV
STFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF
ATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPK
HVIECAKQKALELEEFQYIGESQGYDIMEPAAKKCYLEREQGEKIIQEFLSKVKQMPF
TEMSEENITIKLKQLKAEVIAKNNSFVNEIISRIKVTT"
BASE COUNT 855 a 417 c 539 g 726 t
ORIGIN
1 gtaaaatgaa ttttgaatct tttgtaaaag atcttcttct ggttcgtcag tatagagttg
61 aagtttataa gaatagagct ggaaataagg catccaagga gaatgattgg tatttggcat
121 ataaggcttc tcctggcaat ctctctcagt ttgaagacat tctctttggt aacaatgata
181 tgtcagcttc cattggtgtt gtgggtgtta aaatgtccgc agttgatggc cagagacatg
241 gggaaactga gacagataat tcaaagagga ggaattctga tcacagaaag aaaaaaagct
301 gacttttcca caaaagacat ttatcaggac ctcaaccggt tgttgaaagg caaaaaggga
361 gagcagatga atagtgctgt attgccagaa atggagaatc agggttctgt tgaagatacc
421 actggctctc agtctctggc tgccttgctg aataagtgta aaacccctca aggacaaaga
481 cttgttaacc agtggattaa gcagcctctc atggataaga acagaataga ggagagattg
541 aatttagtgg aagcttttgt agaagatgca gaattgaggc agactttaca agaagattta
601 cttcgtcgat tcccagatct taaccgactt gccaagaagt ttcaaagaca agcagcaaac
661 ttacaagatt gttaccgact ctatcagggt ataaatcaac tacctaatgt tatacaggct
721 ctggaaaaac atgaaggaaa acaccagaaa ttattgttgg cagtttttgt gactcctctt
781 actgatcttc gttctgactt ctccaagttt caggaaatga tagaaacaac tttagatatg
841 gatcaggtgg aaaaccatga attccttgta aaaccttcat ttgatcctaa tctcagtgaa
901 ttaagagaaa taatgaatga cttggaaaag aagatgcagt caacattaat aagtgcagcc
961 agagatcttg gcttggaccc tggcaaacag attaaactgg attccagtgc acagtttgga
1021 tattactttc gtgtaacctg taaggaagaa aaagtccttc gtaacaataa aaactttagt
1081 actgtagata tccagaagaa tggtgttaaa tttaccaaca gcaaattgac ttctttaaat
1141 gaagagtata ccaaaaataa aacagaatat gaagaagccc aggatgccat tgttaaagaa
1201 attgtcaata tttcttcagg ctatgtagaa ccaatgcaga cactcaatga tgtgttagct
1261 cagctagatg ctgttgtcag ctttgctcac gtgtcaaatg gagcacccgt tccatatgta
1321 cgaccagcca ttttggagaa aggacaagga agaattatat taaaagcatc caggcatgct
1381 tgtgttgaag ttcaagatga aattgcattt attcctaatg acgtatactt tgaaaaagat
1441 aaacagatgt tccacatcat tactggcccc aatatgggag gtaaatcaac atatattcga
1501 caaactgggg tgatagtact catggcccaa attgggtgtt ttgtgccgtg tgagtcagca
1561 gaagtgtcca ttgtggactg catcttagcc cgagtagggg ctggtgacag tcaattgaaa
1621 ggagtctcca cgttcatggc tgaaatgttg gaaactgctt ctatcctcag gtctgcaacc
1681 aaagattcat taataatcat agatgaattg ggaagaggaa cttctaccta cgatggattt
1741 gggttagcat gggctatatc agaatacatt gcaacaaaga ttggtgcttt ttgcatgttt
1801 gcaacccatt ttcatgaact tactgccttg gccaatcaga taccaactgt taataatcta
1861 catgtcacag cactcaccac tgaagagacc ttaactatgc tttatcaggt gaagaaaggt
1921 gtctgtgatc aaagttttgg gattcatgtt gcagagcttg ctaatttccc taagcatgta
1981 atagagtgtg ctaaacagaa agccctggaa cttgaggagt ttcagtatat tggagaatcg
2041 caaggatatg atatcatgga accagcagca aagaagtgct atctggaaag agagcaaggt
2101 gaaaaaatta ttcaggagtt cctgtccaag gtgaaacaaa tgccctttac tgaaatgtca
2161 gaagaaaaca tcacaataaa gttaaaacag ctaaaagctg aagtaatagc aaagaataat
2221 agctttgtaa atgaaatcat ttcacgaata aaagttacta cgtgaaaaat cccagtaatg
2281 gaatgaaggt aatattgata agctattgtc tgtaatagtt ttatattgtt ttatattaac
2341 cctttttcca tagtgttaac tgtcagtgcc catgggctat caacttaata agatatttag
2401 taatatttta ctttgaggac attttcaaag atttttattt tgaaaaatga gagctgtaac
2461 tgaggactgt ttgcaattga cataggcaat aataagtgat gtgctgaatt ttataaataa
2521 aatcatgtag tttgtgg
//