LOCUS AK299635 2050 bp mRNA linear HUM 31-JUL-2008
DEFINITION Homo sapiens cDNA FLJ51291 complete cds, highly similar to FYVE,
RhoGEF and PH domain-containing protein 1.
ACCESSION AK299635
VERSION AK299635.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2050)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2050
/clone="OCBBF2019391"
/clone_lib="OCBBF2"
/db_xref="H-InvDB:HIT000494259"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 170..1747
/codon_start=1
/note="highly similar to FYVE, RhoGEF and PH
domain-containing protein 1"
/protein_id="BAG61561.1"
/transl_table=1
/translation="MLPQPTSQPPVPQLPEGEASRCLFLLAPGPRDGEKVPNRDSGID
SISSPSNSEETCFVSDDGPPSHSLCPGPPALASVPVALADPHRPGSQEVDSDLEEEDD
EEEEEEKDREIPVPLMERQESVELTVQQKVFHIANELLQTEKAYVSRLHLLDQVFCAR
LLEEARNRSSFPADVVHGIFSNICSIYCFHQQFLLPELEKRMEEWDRYPRIGDILQKL
APFLKMYGEYVKNFDRAVELVNTWTERSTQFKVIIHEVQKEEACGNLTLQHHMLEPVQ
RIPRYELLLKDYLLKLPHGSPDSKDAQKSLELIATAAEHSNAAIRKMERMHKLLKVYE
LLGGEEDIVSPTKELIKEGHILKLSAKNGTTQDRYLILFNDRLLYCVPRLRLLGQKFS
VRARIDVDGMELKESSNLNLPRTFLVSGKQRSLELQARTEEEKKDWVQAINSTLLKHE
QTLETFKLLNSTNREDEDTPPNSPNVDLGKRAPTPIREKEVTMCMRCQEPFNSITKRR
HHCKACGHVSVGRQGQS"
BASE COUNT 474 a 625 c 583 g 368 t
ORIGIN
1 actattccca ttcggggaga aagaagagac cccgcacttg gatccgaccg acttctcgcc
61 ccggggccac ggaagtggct cgccgtccac cggagagtcc ccgccgagcg tagccctcca
121 accctcgccc aaccgcagcc gcatagacag cgctccccca gagccagtca tgttgccaca
181 gccaacctcg cagccaccag tgccccagct ccccgagggt gaggcctccc gctgcctgtt
241 tctgctggct cctgggcccc gggacggtga gaaggtgccc aaccgggaca gcggcattga
301 tagcatcagc tcgccatcca acagcgagga gacctgcttc gtcagtgatg acgggccccc
361 cagccacagc ctctgccctg ggccccctgc cctggctagt gtgcctgttg ccttggccga
421 cccccaccgg cctggctccc aagaggttga cagtgacctg gaggaggagg acgacgagga
481 ggaggaggaa gagaaggaca gagaaatccc agtgcccctg atggagagac aggagtctgt
541 ggagttgact gtgcagcaaa aggtgtttca cattgccaat gagctcctgc aaactgagaa
601 ggcctacgtt tccaggctcc acctcctgga tcaggtgttc tgtgcccggc tgctggaaga
661 agctcggaac cgcagttcct tcccggccga cgttgtccac ggcatcttct ctaacatctg
721 ctccatctat tgcttccacc agcagttcct gctgcctgag ctagagaagc gcatggagga
781 atgggaccgc tatccacgca ttggagacat cctgcagaaa ctggccccct tcctcaagat
841 gtatggtgag tatgtgaaga actttgaccg ggccgtggag ctggtcaaca cctggacaga
901 gcgctccacc cagtttaaag tcatcatcca tgaggtgcag aaggaggaag cctgtggcaa
961 cctgacattg cagcaccaca tgctggagcc tgtgcagcgc atcccccgct atgagcttct
1021 tctcaaggac tatctgttaa agctgcccca tggctccccg gacagcaagg atgcccaaaa
1081 gtctctggag ctgatcgcca cagcagcaga gcactcgaat gctgccatcc gcaaaatgga
1141 gcgaatgcat aagctgctga aggtatatga gctgttaggg ggcgaggagg acattgtcag
1201 ccccaccaaa gagctcataa aagaaggcca catccttaag ctgtcagcaa agaatgggac
1261 cactcaagac cgatacctca tactattcaa cgaccgcctc ctttactgcg tgcccaggct
1321 gcggctcctt ggccagaagt ttagcgtgcg ggcacgcatt gatgtagatg gcatggagct
1381 aaaggagagc tccaacctca atctgcctcg aaccttcctg gtgtcaggaa agcagcgctc
1441 cctcgagctc caggccagga ctgaggagga gaagaaagac tgggtccagg ccatcaactc
1501 caccctcctg aagcatgaac agacgctgga gactttcaaa ctgttgaact caacaaacag
1561 ggaagatgaa gacaccccac ccaactctcc aaacgtggat cttgggaagc gggcacctac
1621 gcccatccgg gaaaaggaag tcaccatgtg catgcgctgc caggagccct tcaattctat
1681 caccaaacgc aggcaccact gcaaggcctg cgggcatgtg agtgttggga ggcaggggca
1741 gagctaggga ggggacagaa tggcagccca aaggcccact gcagagtggg taccctccaa
1801 gtggggggag gccacaagtc tgctgtggga gttggtatgc tgaagggaag acccgctgga
1861 atcaggctac tcttgcccac ttgccacccc aggtggtttg tgggaagtgc tccgagttcc
1921 gggcccgcct cgtctatgac aacaaccgct ccaaccgtgt gtgcactgat tgctatgtgg
1981 ccttgcacgg ggtgcctggg agcagtccag cctgcagcca gcatacaccc cagcgccgga
2041 ggtccatcct
//