LOCUS AK299632 2800 bp mRNA linear HUM 31-JUL-2008
DEFINITION Homo sapiens cDNA FLJ56792 complete cds, highly similar to
Leucine-rich repeat and fibronectin type-III domain-containing
protein 5 precursor.
ACCESSION AK299632
VERSION AK299632.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2800)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2800
/clone="OCBBF2019145"
/clone_lib="OCBBF2"
/db_xref="H-InvDB:HIT000494256"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 513..2432
/codon_start=1
/note="highly similar to Leucine-rich repeat and
fibronectin type-III domain-containing protein 5
precursor"
/protein_id="BAG61560.1"
/transl_table=1
/translation="MEKILFYLFLIGIAVKAQICPKRCVCQILSPNLATLCAKKGLLF
VPPNIDRRTVELRLADNFVTNIKRKDFANMTSLVDLTLSRNTISFITPHAFADLRNLR
SLHLNSNRLTKITNDMFSGLSNLHHLILNNNQLTLISSTAFDDVFALEELDLSYNNLE
TIPWDAVEKMVSLHTLSLDHNMIDNIPKGTFSHLHKMTRLDVTSNKLQKLPPDPLFQR
AQVLATSGIISPSTFALSFGGNPLHCNCELLWLRRLSREYDLETCASPPLLTGRYFWS
IPEEEFLCEPPLITRHTHEMRVLEGQRATLRCKARGDPEPAIHWISPEGKLISNATRS
LVYDNGTLDILITTVKDTGAFTCIASNPAGEATQIVDLHIIKLPHLLNSTNHIHEPDP
GSSDISTSTKSGSNTSSSNDGITSLTATRVVGCIQFTTEQDYVRCHFMQSQFLGGTMI
IIIGGIIVASVLVFIIILMIRYKVCNNNGQHKVTKVSNVYSQTNGAQIQGCSVTLPQS
VSKQAVGHEENAQCCKATSDNVIQSSETCSSQDSATTTSALPPSWTSSTSVSQKQKRK
TGTKPSTEPQNEAVTNVESQNTNRNNSTALQLASRPPDSVTEGPTSKRAHIKPNALLT
NVDQIVQETQRLELI"
BASE COUNT 766 a 657 c 596 g 781 t
ORIGIN
1 gtgtgagtgt gagcgtgtgt ctgtgtgtgc gtgcgcggcc gccctgcctc tgcccgctcc
61 ccgggcgcgg agccgcgggt ttcatggggc gattgcagcg attcccccac ccagagcgac
121 ctgcgggcag cggcggcagt ggcaggagcc gcctttccga ttccctacga tgcgggtgct
181 gagctatggc aaagggcagc gaagtgacga gcgagacccg cgtacgactg tgaaagccac
241 ctggagccac cttgccggga ttgtacctgc aggcagaaag tcttcctacg accgtctttt
301 cccttagagg caccagaatc cctgtaacca ttcatccagg tgttgagaag atatgtagca
361 gccgagcacc catcttttga caccgtcctc tgaaatcagc tttggagatg ctttcactct
421 gtccgtcttc tgcagcagcc aggcagagtg ccgactcctt cacagccgtg aggaactctt
481 caggctccag aagctcttaa acctgatcta caatggaaaa aattcttttt tatctgtttc
541 tcattggcat agcagtgaaa gctcagatct gtccaaagcg ttgtgtctgt cagattttgt
601 ctcctaatct tgcaaccctt tgtgccaaga aagggctttt atttgttcca ccaaacattg
661 acagaagaac tgtggaactg cggttggcag acaattttgt tacaaatatt aaaaggaaag
721 attttgccaa tatgaccagc ttggtggacc tgactctatc caggaataca ataagtttta
781 ttacacctca tgctttcgct gacctacgaa atttgaggtc tttgcatttg aatagcaaca
841 gattgactaa aattacaaat gatatgttca gtggtctttc caatcttcat catttgatac
901 tgaacaacaa tcagctgact ttaatttcct ctacagcgtt tgatgatgtc ttcgcccttg
961 aggagctgga tctgtcctat aataatctag aaaccattcc ttgggatgct gttgagaaga
1021 tggttagctt gcataccctt agtttggatc acaatatgat tgataacatt cctaagggga
1081 ccttctccca tttgcacaag atgactcggt tagatgtgac atcaaataaa ttgcagaagc
1141 taccacctga ccctctcttt cagcgagctc aggtactagc aacctcagga atcataagcc
1201 catctacttt tgcattaagt tttggtggaa accccttgca ttgcaattgt gaattgttgt
1261 ggttgaggcg tctgtccaga gaatatgact tagagacctg tgcttctcct ccacttttaa
1321 ctggccgcta cttttggtca attcctgaag aagagttttt gtgtgagcct cctctcatta
1381 ctcgtcatac acatgagatg agagtcctgg agggacaaag ggcaacactg aggtgcaaag
1441 ccaggggaga ccctgagcct gcaattcact ggatttctcc tgaagggaag cttatttcaa
1501 atgcaacaag atctctggtg tatgataacg gaacacttga cattcttatc acaactgtaa
1561 aggatacagg tgcttttacc tgcattgctt ccaatcctgc tggggaagca acacaaatag
1621 tggatcttca tataattaag ctccctcact tactaaatag tacaaaccat atccatgagc
1681 ctgatcctgg ttcttcagat atctcaactt ctaccaagtc aggttctaat acaagcagta
1741 gtaatgatgg catcacttcc ctcactgcca caagagtcgt gggttgcatc cagtttacta
1801 cggaacagga ttatgtgcgt tgccatttca tgcagtccca gtttttggga ggcaccatga
1861 ttattattat tggtggaatc attgtagcat ctgtgctggt attcatcatt attctgatga
1921 tccggtataa ggtttgcaac aataatgggc aacacaaggt caccaaggtt agcaatgttt
1981 attcccaaac taacggggct caaatacaag gctgtagtgt aacgctgccc cagtccgtgt
2041 ccaaacaagc tgtgggacac gaagagaatg cccagtgttg taaagctacc agtgacaatg
2101 tgattcaatc ttcagaaact tgttcgagtc aggactccgc taccactacc tctgctttgc
2161 ctccttcctg gacttcaagc acttctgtgt cccaaaagca gaaaagaaag actggcacaa
2221 agccaagtac agaaccacag aatgaagccg tcacaaatgt tgaatcccaa aacactaaca
2281 ggaacaactc aactgccttg cagttagcta gccgtcctcc cgattctgtc acagaggggc
2341 ccacgtctaa aagagcacat ataaagccaa atgctttgct gactaatgtt gaccagattg
2401 tccaggaaac acagaggctg gagttaatct gaagagcacc acttctcctc tctctcctga
2461 aaaaatttgc cactgatatt tttactggat aaaattcaaa aatgtttcaa ttcacaaagg
2521 ctaattgttg aactggtgtc gtagaagaaa ttgtctacag gagccaaggt gaaagtctct
2581 gatgacggcg gaactggctc cattagacca tggttcatcc tcttttaaaa ccaaattttt
2641 ttttcttctg gcctacaagt attttttttt taaaaaagaa aaaaagccta cattggcatc
2701 aagttctgta tcaatccatc ttacattgcc atccatgatt taacagactg tagaatcttg
2761 aataatctat atcactttaa caaataaatg ttttactatg
//