LOCUS AK299605 2272 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ59242 complete cds, highly similar to Nuclear
factor 1 B-type.
ACCESSION AK299605
VERSION AK299605.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2272)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2272
/clone="OCBBF2016412"
/clone_lib="OCBBF2"
/db_xref="H-InvDB:HIT000494229"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 399..1736
/codon_start=1
/note="highly similar to Nuclear factor 1 B-type"
/protein_id="BAG61536.1"
/transl_table=1
/translation="MMYSPICLTQDEFHPFIEALLPHVRAIAYTWFNLQARKRKYFKK
HEKRMSKDEERAVKDELLSERPEIKQKWASRLLAKLRKDIRQEYREDFVLTVTGKKHP
CCVLSNPDQKGKIRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERLMKSPHCTNP
ALCVQPHHITVSVKELDLFLAYYVQEQDSGQSGSPSHNDPAENPPGYLEDSFVKSGVF
NVSELVRVSRTPITQGTGVNFPIGEIPSQPYYHDMNSGVNLQRSLSSPPSSKRPKTIS
IDENMEPSPTGDFYPSPSSPAAGSRTWHERDQDMSSPTTMKKPEKPLFSSASPQDSSP
RLSTFPQHHHPGIPGVAHSVISTRTPPPPSPLPFPTQAILPPAPSSYFSHPTIRYPPH
LNPQDTLKNYVPSYDPSSPQTSQLRICDWTMNQNGRHLYPSTSEDTLGITWQS"
BASE COUNT 690 a 570 c 474 g 538 t
ORIGIN
1 ccccaatcca acccacaccg aaccttcgcg caccccctac accccaacaa caacaacaac
61 tgcaaaatag aaaacaaatc cccaagccca ggcgaaaagc agccaacacc ggcggcggcg
121 gcggcctcgg caagcacggc cagcgcgctc ggactgcaag agggttaaaa gtgtagattg
181 gatttcaccc ctggaactct agcacgccga gtgaacttga atctttggct atttaaggag
241 gactgggttt gttgtgaagt tgcggtgatc cagcgcagag ccccgtcctg attgatcgca
301 tcgcggggct cagatgactg taaaatgaat agatgaaatt cttgcttctc gaagattttc
361 ttgggcatct cccggaaagt gcgttttaag gcgaagtcat gatgtattct cccatctgtc
421 tcactcagga tgaatttcac ccattcatcg aggcacttct tccacatgtc cgtgcaattg
481 cctatacttg gttcaacctg caggctcgaa aacgcaagta ctttaaaaag catgagaagc
541 gaatgtcaaa ggatgaagaa agagcagtca aagatgagct tctcagtgaa aggcctgaaa
601 tcaaacagaa gtgggcatcc aggctccttg ccaaactgcg caaagatatt cgccaggagt
661 atcgagagga ctttgtgctc accgtgactg gcaagaagca cccgtgctgt gtcttatcca
721 atcccgacca gaagggtaag attaggagaa tcgactgcct gcgacaggca gacaaagtct
781 ggcgtctgga tctagtcatg gtgatcctgt tcaaaggcat ccccttggaa agtaccgatg
841 gagagcggct catgaaatcc ccacattgca caaacccagc actttgtgtc cagccacatc
901 atatcacagt atcagttaag gagcttgatt tgtttttggc atactacgtg caggagcaag
961 attctggaca gtcaggaagt ccaagccaca atgatcctgc cgagaatcct ccaggttacc
1021 ttgaggatag ttttgtaaaa tctggagtct tcaatgtatc agaacttgta agagtatcca
1081 gaacgcccat aacccaggga actggagtca acttcccaat tggagaaatc ccaagccaac
1141 catactatca tgacatgaac tcgggggtca atcttcagag gtctctgtct tctccaccaa
1201 gcagcaaaag acccaaaact atatccatag atgaaaatat ggaaccaagt cctacaggag
1261 acttttaccc ctctccaagt tcaccagctg ctggaagtcg aacatggcac gaaagagatc
1321 aagatatgtc ttctccgact actatgaaga agcctgaaaa gccattgttc agctctgcat
1381 ctccacagga ttcttcccca agactgagca ctttccccca gcaccaccat cccggaatac
1441 ctggagttgc acacagtgtc atctcaactc gaactccacc tccaccttca ccgttgccat
1501 ttccaacaca agctatcctt cctccagccc catcgagcta cttttctcat ccaacaatca
1561 gatatcctcc ccacctgaat cctcaggata ctctgaagaa ctatgtacct tcttatgacc
1621 catccagtcc acaaaccagc cagctgagga tttgtgactg gaccatgaat caaaacggca
1681 ggcatttata ccccagtacc agtgaggata cattgggaat tacttggcaa agttgagtcc
1741 tggtacctgg gctagcttgg ttcctttcca agtgtcaaat aggacaccca tcttaccggc
1801 caatgtccaa aattacggtt tgaacataat tggagaacct ttccttcaag cagaaacaag
1861 caactgaggg aaaaagaaac acaacaatag tttaagaaat ttttttttta aataaaaaaa
1921 aaggaaaaga ggaagactgg acaaaacaac acaaaggcag aaaggaaaga aactgaagaa
1981 agaagataat agaccagcaa ttgcagcact tacaatcact aattccctta aggttgaaac
2041 tgtaatgaca taaaaagggt cgatgatatt tcactgatgg tagatcgcag cccctgcaac
2101 gtagcctttg ttacatgaag tccgctggga aatagatgtt ctgtctctat gacaatatat
2161 tttaactgac tttctagatg ccttaatatt tgcatgataa gctagtttta ttggtttagt
2221 attcttgttg tttacgcatg gaatcactat tcctggttat ctcaccaacg aa
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