LOCUS AK299549 1956 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ56236 complete cds, highly similar to
Exportin-2.
ACCESSION AK299549
VERSION AK299549.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1956)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1956
/clone="OCBBF2009040"
/clone_lib="OCBBF2"
/db_xref="H-InvDB:HIT000494173"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 197..1906
/codon_start=1
/note="highly similar to Exportin-2"
/protein_id="BAG61494.1"
/transl_table=1
/translation="METWMNNFHTLLTLDNKLLQTDDEEEAGLLELLKSQICDNAALY
AQKYDEEFQRYLPRFVTAIWNLLVTTGQEVKYDLLVSNAIQFLASVCERPHYKNLFED
QNTLTSICEKVIVVHTYAAHALERLFTMRGPNNATLFTAAEIAPFVEILLTNLFKALT
LPGSSENEYIMKAIMRSFSLLQEAIIPYIPTLITQLTQKLLAVSKNPSKPHFNHYMFE
AICLSIRITCKANPAAVVNFEEALFLVFTEILQNDVQEFIPYVFQVMSLLLETHKNDI
PSSYMALFPHLLQPVLWERTGNIPALVRLLQAFLERGSNTIASAAADKIPGLLGVFQK
LIASKANDHQGFYLLNSIIEHMPPESVDQYRKQIFILLFQRLQNSKTTKFIKSFLVFI
NLYCIKYGALALQEIFDGIQPKMFGMVLEKIIIPEIQKVSGNVEKKICAVGITKLLTE
CPPMMDTEYTKLWTPLLQSLIGLFELPEDDTIPDEEHFIDIEDTPGYQTAFSQLAFAG
KKEHDPVGQMVNNPKIHLAQSLHKLSTACPGRVPSMVSTSLNAEALQYLQGYLQAASV
TLL"
BASE COUNT 589 a 407 c 360 g 600 t
ORIGIN
1 atggactgaa attaagcttg ttctggatgc ctttgctttg cctttgacta atctttttaa
61 ggccactatt gaactctgca gtacccatgc aaatgatgcc tctgccctga ggattctgtt
121 ttcttccctg atcctgatct caaaattgtt ctatagttta aactttcagg atctccctga
181 attttttgaa gataatatgg aaacttggat gaataatttt catactctct taacattgga
241 taataagctt ttacaaactg atgatgaaga ggaagccggc ttattggagc tcttaaaatc
301 ccagatttgt gataatgccg cactctatgc acaaaagtac gatgaagaat tccagcgata
361 cctgcctcgt tttgttacag ccatctggaa tttactagtt acaacgggtc aagaggttaa
421 atatgatttg ttggtaagta atgcaattca atttctggct tcagtttgtg agagacctca
481 ttataagaat ctatttgagg accagaacac gctgacaagt atctgtgaaa aggttattgt
541 tgttcatact tacgcagctc atgctcttga acggctcttt actatgcgag ggcctaacaa
601 tgccactctc tttacagctg cagaaatcgc accgtttgtt gagattctgc taacaaacct
661 tttcaaagct ctcacacttc ctggctcttc agaaaatgaa tatattatga aagctatcat
721 gagaagtttt tctctcctac aagaagccat aatcccctac atccctactc tcatcactca
781 gcttacacag aagctattag ctgttagtaa gaacccaagc aaacctcact ttaatcacta
841 catgtttgaa gcaatatgtt tatccataag aataacttgc aaagctaacc ctgctgctgt
901 tgtaaatttt gaggaggctt tgtttttggt gtttactgaa atcttacaaa atgatgtgca
961 agaatttatt ccatacgtct ttcaagtgat gtctttgctt ctggaaacac acaaaaatga
1021 catcccgtct tcctatatgg ccttatttcc tcatctcctt cagccagtgc tttgggaaag
1081 aacaggaaat attcctgctc tagtgaggct tcttcaagca ttcttagaac gcggttcaaa
1141 cacaatagca agtgctgcag ctgacaaaat tcctgggtta ctaggtgtct ttcagaagct
1201 gattgcatcc aaagcaaatg accaccaagg tttttatctt ctaaacagta taatagagca
1261 catgcctcct gaatcagttg accaatatag gaaacaaatc ttcattctgc tattccagag
1321 acttcagaat tccaaaacaa ccaagtttat caagagtttt ttagtcttta ttaatttgta
1381 ttgcataaaa tatggggcac tagcactaca agaaatattt gatggtatac aaccaaaaat
1441 gtttggaatg gttttggaaa aaattattat tcctgaaatt cagaaggtat ctggaaatgt
1501 agagaaaaag atctgtgcgg ttggcataac caaattacta acagaatgtc ccccaatgat
1561 ggacactgag tataccaaac tgtggactcc attattacag tctttgattg gtctttttga
1621 gttacccgaa gatgatacca ttcctgatga ggaacatttt attgacatag aagatacacc
1681 aggatatcag actgccttct cacagttggc atttgctggg aaaaaagagc atgatcctgt
1741 aggtcaaatg gtgaataacc ccaaaattca cctggcacag tcacttcaca agttgtctac
1801 cgcctgtcca ggaagggttc catcaatggt gagcaccagc ctgaatgcag aagcgctcca
1861 gtatctccaa gggtaccttc aggcagccag tgtgacactg ctttaaactg catttttcta
1921 atgggctaaa cccagatggt ttcctaggaa atcaca
//