LOCUS AK299523 3694 bp mRNA linear HUM 21-JAN-2009 DEFINITION Homo sapiens cDNA FLJ56148 complete cds, highly similar to Homo sapiens pleckstrin homology domain containing, family G (with RhoGef domain) member 5, transcript variant 1, mRNA. ACCESSION AK299523 VERSION AK299523.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3694) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..3694 /clone="OCBBF2006499" /clone_lib="OCBBF2" /db_xref="H-InvDB:HIT000494147" /db_xref="taxon:9606" /dev_stage="fetal" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="brain" CDS 27..3254 /codon_start=1 /note="highly similar to Homo sapiens pleckstrin homology domain containing, family G (with RhoGef domain) member 5, transcript variant 1, mRNA" /protein_id="BAH13058.1" /transl_table=1 /translation="MGTGPGVSGRLAASRPGPGLPLRDSEPSWAGGRARDGESQVCHH ADCQQLHRRGPLNLCEACDSKFHSTMHYDGHVRFDLPPQGSVLARNVSTRSCPPRTSP AVDLEEEEEESSVDGKGDRKSTGLKLSKKKARRRHTDDPSKECFTLKFDLNVDIETEI VPAMKKKSLGEVLLPVFERKGIALGKVDIYLDQSNTPLSLTFEAYRFGGHYLRVKAPA KPGDEGKVEQGMKDSKSLSLPILRPAGTGPPALERVDAQSRRESLDILAPGRRRKNMS EFLGEASIPGQEPPTPSSCSLPSGSSGSTNTGDSWKNRAASRFSGFFSSGPSTSAFGR EVDKMEQLEGKLHTYSLFGLPRLPRGLRFDHDSWEEEYDEDEDEDNACLRLEDSWREL IDGHEKLTRRQCHQQEAVWELLHTEASYIRKLRVIINLFLCCLLNLQESGLLCEVEAE RLFSNIPEIAQLHRRLWASVMAPVLEKARRTRALLQPGDFLKGFKMFGSLFKPYIRYC MEEEGCMEYMRGLLRDNDLFRAYITWAEKHPQCQRLKLSDMLAKPHQRLTKYPLLLKS VLRKTEEPRAKEAVVAMIGSVERFIHHVNACMRQRQERQRLAAVVSRIDAYEVVESSS DEVDKLLKEFLHLDLTAPIPGASPEETRQLLLEGSLRMKEGKDSKMDVYCFLFTDLLL VTKAVKKAERTRVIRPPLLVDKIVCRELRDPGSFLLIYLNEFHSAVGAYTFQASGQAL CRGWVDTIYNAQNQLQQLRAQEPPGSQQPLQSLEEEEDEQEEEEEEEEEEEEGEDSGT SAASSPTIMRKSSGSPDSQHCASDGSTETLAMVVVEPGDTLSSPEFDSGPFSSQSDET SLSTTASSATPTSELLPLGPVDGRSCSMDSAYGTLSPTSLQDFVAPGPMAELVPRAPE SPRVPSPPPSPRLRRRTPVQLLSCPPHLLKSKSEASLLQLLAGAGTHGTPSAPSRSLS ELCLAVPAPGIRTQGSPQEAGPSWDCRGAPSPGSGPGLVGCLAGEPAGSHRKRCGDLP SGASPRVQPEPPPGVSAQHRKLTLAQLYRIRTTLLLNSTLTASEV" BASE COUNT 709 a 1205 c 1163 g 617 t ORIGIN 1 gcagaccgcg gcttcctccg gccgccatgg ggacaggacc cggtgtctcc ggacgcctag 61 cagcctccag gccgggcccg gggctgcccc tccgggactc ggagccctcc tgggccgggg 121 gtcgtgcccg cgacggtgaa agccaggtat gtcaccacgc cgactgccag cagctgcacc 181 gccgggggcc cctcaacctc tgcgaggcct gtgacagcaa gttccacagc accatgcatt 241 atgatgggca tgtccgcttc gaccttcccc cacaaggctc tgtgctggcc cggaacgtgt 301 ccacccggtc atgcccgccg cgcaccagcc ccgcagtgga cttggaggag gaggaggagg 361 agagctctgt ggatggcaaa ggggaccgga agagcacagg cctgaaactc tccaagaaga 421 aagcaaggag gagacacacg gatgacccaa gcaaggaatg cttcactctg aaatttgacc 481 tgaatgtgga cattgagaca gagatcgtcc cagccatgaa gaagaagtca ctgggggagg 541 tgctgctgcc tgtatttgaa aggaagggca ttgcgctggg caaagtggac atctacctgg 601 accagtccaa cacacccctg tccctcacct tcgaggccta caggttcggg ggacactacc 661 ttcgtgtcaa agccccagcc aagcctggag atgagggcaa ggtggagcag ggcatgaagg 721 actccaagtc cctgagtttg ccgattctgc ggccagctgg gaccgggccc cccgccctgg 781 agcgtgtgga cgcccagagc cgccgggaga gcctggacat cttggcccct ggccgccgcc 841 gcaagaacat gtcggagttc ctgggggagg cgagcatccc cgggcaggag ccccccacgc 901 cctccagctg ctctctgccc agcggcagca gtggcagcac caacactggc gacagctgga 961 agaaccgggc ggccagtcgc ttcagcggct ttttcagctc cggccccagc accagcgcct 1021 ttggccggga ggtagacaag atggagcagc tggagggcaa gctgcacacc tacagcctct 1081 tcgggctgcc caggctgccc cgggggctgc gcttcgacca tgactcctgg gaggaggagt 1141 acgatgaaga cgaggatgag gacaatgcct gcctgaggct ggaggacagc tggcgggagc 1201 tcattgatgg gcatgagaag ctgacccggc ggcagtgcca ccagcaggag gcggtgtggg 1261 agctgctgca cacggaggcc tcctacatca ggaaactgcg ggtgatcatc aacctgttcc 1321 tgtgctgcct cctgaacctg caagagtcag ggctgctgtg tgaggtggag gcggagcgcc 1381 tgttcagcaa catcccggag atcgcgcagc tgcaccgcag gctgtgggct agcgtgatgg 1441 cgccggtgct ggagaaggcg cggcgcacgc gagcgctgct acagcccggg gacttcctca 1501 aaggcttcaa gatgttcggc tcgctcttca agccctacat ccgctactgc atggaggagg 1561 agggctgcat ggagtacatg cgcggcctgc tgcgcgacaa cgacctcttc cgggcctaca 1621 tcacgtgggc ggagaagcac ccacagtgcc agaggctgaa gctgagcgac atgctggcca 1681 aaccccacca gcggctcacc aagtacccgc tgctgctcaa gtcggtgctg aggaagaccg 1741 aggagccgcg cgccaaggag gccgtcgtcg ccatgatcgg ctccgtggag cgcttcatcc 1801 accacgtgaa cgcgtgcatg cggcagcggc aggagcggca gcggctggcg gccgtggtga 1861 gccgcatcga cgcctacgag gtggtggaaa gcagcagcga cgaagtggac aagctcctga 1921 aggaatttct gcacctggac ttgacagcgc ccatccctgg cgcctccccg gaggagacgc 1981 ggcagctgct gctggagggg agcctgagga tgaaggaggg gaaggacagc aagatggatg 2041 tgtactgctt cctcttcacg gatctgctgt tggtgaccaa agcagtgaag aaggcagaga 2101 ggaccagggt catcaggcca cccctgctcg tggacaagat tgtgtgccgg gagctacggg 2161 accctgggtc cttcctcctt atctacctga atgagtttca cagtgctgta ggggcctaca 2221 cgttccaggc cagtggccag gccttgtgcc gtggctgggt ggacaccatt tacaatgccc 2281 agaaccagct gcaacagctg cgtgcacagg agcccccagg cagtcagcag cccctgcaga 2341 gcctggaaga ggaggaggat gagcaggagg aggaagagga ggaggaggag gaggaggagg 2401 aaggcgagga cagtggcact tcagctgcca gctcccctac catcatgcgg aaaagcagcg 2461 gcagccccga ctctcagcac tgtgcctcag atggctccac ggagaccctg gccatggttg 2521 tggtagagcc tggggacacg ctgtcctccc ccgagttcga cagcggtcct ttcagctccc 2581 agtctgatga gacctctctc agcaccactg cctcatctgc cacgcccacc agtgagctgc 2641 tgcccctggg tccggtggac ggccgctcct gctccatgga ctctgcctac ggcaccctct 2701 ccccaacctc cttacaagac tttgtggccc caggcccaat ggcagagcta gtgcctcggg 2761 ccccagagtc cccacgagtt ccttcccctc caccctcgcc ccgtctccgc cgccgcaccc 2821 ctgtccagct gttgagctgc ccgccccacc tgctcaagtc taagtccgag gccagcctcc 2881 tccagctgct ggcaggggct ggcacccatg ggacaccctc tgcccccagc cgcagcctgt 2941 cagagctctg cctggctgtt ccagccccag gtattaggac tcagggctcc cctcaggaag 3001 ctgggcccag ctgggattgc cgaggggccc ctagccctgg cagcggtcct gggctagtcg 3061 gctgcctggc cggggaacct gcaggctccc acaggaagag gtgtggagac ctgccctcgg 3121 gggcctctcc cagggtccag cctgagcccc caccaggggt ctctgcccag cacaggaagc 3181 tgaccctggc ccagctctac cgaatcagga ccaccctgct gcttaactcc acgctcactg 3241 cctcggaggt ctgagcagag ggaggccccc aagagtgcca ttgaccaaga gacagcagac 3301 agcctgcctc ctggggcgtg ccggcacctg cttcagctac tgcctcctgt atgcatgagc 3361 cggatgctgg gcaggatccc tgcctacgcc cgggcccgat ttgcgctttg ccggactgga 3421 tggagtggag gaggcccagg ccacagtacc accccacctg cccaggcagc ccctcgtcac 3481 ctactccccg aagttaccag ctcagctcga gtcttcaggg ctgggctcct aggctgccca 3541 tcctacttct accctcactg gcctccagtg ggattcactc ctgccctgcc cccaccttcc 3601 cagtcccaca ggccacccct ggcttgggct gggttctgtg aagttacgta tttattgagc 3661 ttttggttct tttataaaga cttgtctaga ctcc //