LOCUS AK299499 2360 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ52520 complete cds, highly similar to
Eomesodermin homolog.
ACCESSION AK299499
VERSION AK299499.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2360)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2360
/clone="OCBBF2002500"
/clone_lib="OCBBF2"
/db_xref="H-InvDB:HIT000494123"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 209..1921
/codon_start=1
/note="highly similar to Eomesodermin homolog"
/protein_id="BAH13052.1"
/transl_table=1
/translation="MDSLSSERYYLQSPGPQGSELAAPCSLFPYQAAAGAPHGPVYPA
PNGARYPYGSMLPPGGFPAAVCPPGRAQFGPGAGAGSGAGGSSGGGGGPGTYQYSQGA
PLYGPYPGAAAAGSCGGLGGLGVPGSGFRAHVYLCNRPLWLKFHRHQTEMIITKQGRR
MFPFLSFNINGLNPTAHYNVFVEVVLADPNHWRLQGGKWVTCGKADNNMQGNKMYVHP
ESPNTGSHWMRQEISFGKLKLTNNKGANNNNTQMIVLQSLHKYQPRLHIVEVTEDGVE
DLNEPSKTQTFTFSETQFIAVTAYQNTDITQLKIDHNPFAKGFRDNYDSMYTASENDR
LTPSPTDSPRSHQIVPGGRYGVQSFFPEPFVNTLPQARYYNGERTVPQTNGLLSPQQS
EEVANPPQRWLVTPVQQPGTNKLDISSYESEYTSSTLLPYGIKSLPLQTSHALGYYPD
PTFPAMAGWGGRGSYQRKMAAGLPWTSRTSPTVFSEDQLSKEKVKEEIGSSWIETPPS
IKSLDSNDSGVYTSACKRRRLSPSNSSNENSPSIKCEDINAEEYSKDTSKGMGGYYAF
YTTP"
BASE COUNT 587 a 635 c 592 g 546 t
ORIGIN
1 aagtggtcaa cttgaccgat gctttggcaa ttgaaaaagg gcagaaaggc gcgggctagt
61 gggtggatgg ggacaaagat ctaagtcacc ttcttccagc gtgtgagcct gggaggaggg
121 tgggggtcct gaggagctgc cctccgctgc tgcaggcgcc gccgccgccg ccgccgccgc
181 cgcggctgcg gccactgcgc gctactccat ggacagcctg agctccgagc ggtactacct
241 ccagtccccc ggtcctcagg ggtcggagct ggctgcgccc tgctcactct tcccgtacca
301 ggcggcggct ggggcgcccc acggacctgt gtacccggct cctaacgggg cgcgctaccc
361 ctacggctcc atgctgcccc ccggcggctt ccccgcggct gtgtgcccac ccgggagggc
421 gcagttcggc ccaggagccg gtgcgggcag tggcgcgggc ggtagcagcg gcgggggcgg
481 cggcccgggc acctatcagt acagccaggg ggctccgctc tacgggccgt accctggagc
541 cgcagcggcg ggatcttgcg gaggactggg gggcctgggg gttccaggtt ctggcttccg
601 tgcccacgtc tacctgtgca accggcctct gtggctcaaa ttccaccgcc accaaactga
661 gatgatcatt acgaaacagg gcaggcgcat gtttcctttc ttgagcttca acataaacgg
721 actcaatccc actgcccact acaatgtgtt cgtagaggtg gtgctggcgg accccaacca
781 ctggcgctta caggggggca aatgggtgac ctgtggcaaa gccgacaata acatgcaggg
841 caacaaaatg tatgttcacc cagagtctcc taatactggt tcccactgga tgagacagga
901 gatttcattc gggaaattaa aactcaccaa taacaaaggc gcaaataaca acaacaccca
961 gatgatagtc ttacaatcct tacacaaata ccaaccccga ctgcatattg ttgaagttac
1021 agaggatggc gtggaggact tgaatgagcc ctcaaagacc cagactttta ccttctcaga
1081 aacgcaattc attgcagtga ctgcctacca aaacaccgat attactcaac taaagattga
1141 tcataacccc tttgcaaaag gcttcagaga caactatgat tccatgtaca ccgcttcaga
1201 aaatgacagg ttaactccat ctcccacgga ttctcctaga tcccatcaga ttgtccctgg
1261 aggtcggtac ggcgttcaat ccttcttccc ggagcccttt gtcaacactt tacctcaagc
1321 ccgctattat aatggcgaga gaaccgtgcc acagaccaac ggcctccttt caccccaaca
1381 gagcgaagag gtggccaacc ctccccagcg gtggcttgtc acgcctgtcc agcaacctgg
1441 gaccaacaaa ctagacatca gttcctatga atctgaatat acttctagca cattgctccc
1501 atatggcatt aaatccttgc cccttcagac atcccatgcc ctggggtatt acccagaccc
1561 aacctttcct gcaatggcag ggtggggagg tcgaggttct taccagagga agatggcagc
1621 tggactacca tggacctcca gaacaagccc cactgtgttc tctgaagatc agctctccaa
1681 ggagaaagtg aaagaggaaa ttggctcttc ttggatagag acaccccctt ccatcaaatc
1741 tctagattcc aatgattcag gagtatacac cagtgcttgt aagcgaaggc ggctgtctcc
1801 tagcaactcc agtaatgaaa attcaccctc cataaagtgt gaggacatta atgctgaaga
1861 gtatagtaaa gacacctcaa aaggcatggg agggtattat gctttttaca caactcccta
1921 aagagttatt ttaacctcaa aaattagcta actttttgca gatggacttg gtggtgtttt
1981 ttgttgtctt ctttgcctag gttgccaaaa agatgtttgc cttccacctt gatgcatcct
2041 gttttgtgca attctctaaa agaaggtgcc aaagcttttt gattgctgca ggtaactgaa
2101 acaaacctag catttttaaa aaataagatt aatggaagac tttaaggtat tttaaaattc
2161 gaagggtatc caaggttctg tatttattta ttggggagac actaacaatt caaagaagca
2221 ggctgtgaac attgggtgcc cagtgctatc agatgagtta aaacctttga ttctcatttc
2281 tatttgtaaa ttcttaagca aatagaagcc gagtgttaag gtgttttgct tctgaaagag
2341 ggctgtgcct tccgtttcag
//