LOCUS AK299428 1925 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ54657 complete cds, highly similar to
Keratin, type II cytoskeletal 6A.
ACCESSION AK299428
VERSION AK299428.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1925)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1925
/clone="NTONG2004819"
/clone_lib="NTONG2"
/db_xref="H-InvDB:HIT000494052"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="tongue"
CDS 69..1718
/codon_start=1
/note="highly similar to Keratin, type II cytoskeletal 6A"
/protein_id="BAG61408.1"
/transl_table=1
/translation="MASTSTTIRSHSSSRSGFSSVSVSRSRGSGGLGGACGGAGFGSR
SLYGLGGSKRISIGGGSCAISGGYGSRAGGSYGFGGAGSGFGFGGGAGIGFGLGGGAG
LAGGFGGPGFPVCPPGGIQEVTVNQSLLTPLNLQIDPTIQRVRAEEREQIKTLNNKFA
SFIDKVRFLEQQNKVLETKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSIVGERG
RLDSELRGMQDLVEDFKNKYEDEINKRTAAENEFVTLKKDVDAAYMNKVELQAKAYTL
TDEINFLRALYDAELSQMQTHISDTSVVLSMDNNRNLDLDSIIAEVKAQYEEIAQRSR
AEAESWYQTKYEELQVTAGRHGDDLRNTKQEIAEINRMIQRLRSEIDHVKKQCANLQA
AIADAEQRGEMALKDAKNKLEGLEDALQKAKQDLARLLKEYQELMNVKLALDVEIATY
RKLLEGEECRLNGEGVGQVNISVVQSTVSSGYGGASGVGSGLGLGGGSSYSYGSGLGV
GGGFSSSSGRAIGGGLSSVGGGSSTIKYTTTSSSSRKSYKH"
BASE COUNT 418 a 544 c 584 g 379 t
ORIGIN
1 gtcctgcttc tcttccctct ctcctccagc ctctcacact ctcctcagct ctctcatctc
61 ctggaaccat ggccagcaca tccaccacca tcaggagcca cagcagcagc cgctctggct
121 tcagcagcgt ctccgtgtcc cgctccaggg gcagtggtgg cctgggtggt gcatgtggag
181 gagctggctt tggcagccgc agtctgtatg gcctgggggg ctccaagagg atctccattg
241 gagggggcag ctgtgccatc agtggcggct atggcagcag agccggaggc agctatggct
301 ttggtggcgc cgggagtgga tttggtttcg gtggtggagc cggcattggc tttggtctgg
361 gtggtggagc cggccttgct ggtggctttg ggggccctgg cttccctgtg tgcccccctg
421 gaggcatcca agaggtcacc gtcaaccaga gtctcctgac tcccctcaac ctgcaaatcg
481 atcccaccat ccagcgggtg cgggccgagg agcgtgagca gatcaagacc ctcaacaaca
541 agtttgcctc cttcatcgac aaggtgcggt tcctggagca gcagaacaag gttctggaaa
601 caaagtggac cctgctgcag gagcagggca ccaagactgt gaggcagaac ctggagccgt
661 tgttcgagca gtacatcaac aacctcagga ggcagctgga cagcattgtc ggggaacggg
721 gccgcctgga ctcagagctc agaggcatgc aggacctggt ggaggacttc aagaacaaat
781 atgaggatga aatcaacaag cgcacagcag cagagaatga atttgtgact ctgaagaagg
841 atgtggatgc tgcctacatg aacaaggttg aactgcaagc caaggcatac actctcacag
901 acgagatcaa cttcctgaga gccttgtatg atgcagagct gtcccagatg cagacccaca
961 tctcagacac atctgtggtg ctgtccatgg acaacaaccg caacctggac ctggacagca
1021 tcatcgctga ggtcaaggcc caatatgagg agattgctca gagaagccgg gctgaggctg
1081 agtcctggta ccagaccaag tacgaggagc tgcaggtcac agcaggcaga catggggacg
1141 acctgcgcaa caccaagcag gagattgctg agatcaaccg catgatccag aggctgagat
1201 ctgagatcga ccacgtcaag aagcagtgcg ccaacctgca ggccgccatt gctgatgctg
1261 agcagcgtgg ggagatggcc ctcaaggatg ccaagaacaa gctggaaggg ctggaggatg
1321 ccctgcagaa ggccaagcag gacctggccc ggctgctgaa ggagtaccag gagctgatga
1381 atgtcaagct ggccctggac gtggagatcg ccacctaccg caagctgctg gagggtgagg
1441 agtgcaggct gaatggcgaa ggcgttggac aagtcaacat ctctgtggtg cagtccaccg
1501 tctccagtgg ctatggcggt gccagtggtg tcggcagtgg cttaggcctg ggtggaggaa
1561 gcagctactc ctatggcagt ggtcttggcg ttggaggtgg cttcagttcc agcagtggca
1621 gagccattgg gggtggcctc agctctgttg gaggcggcag ttccaccatc aagtacacca
1681 ccacctcctc ctccagcagg aagagctata agcactaaag tgcgtctgct agctctcggt
1741 cccacagtcc tcaggcccct ctctggctgc agagccctct cctcaggttg cctgtcctct
1801 cctggcctcc agtctcccct gctgtcccag gtagagctgg ggatgaatgc ttagtgccct
1861 cacttcttct ctctctctct ataccatctg agcacccatt gctcaccatc agatcaacct
1921 ctgat
//