LOCUS AK299412 1369 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ54536 complete cds, highly similar to
Mitochondrial 28S ribosomal protein S27.
ACCESSION AK299412
VERSION AK299412.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1369)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1369
/clone="NTONG2003806"
/clone_lib="NTONG2"
/db_xref="H-InvDB:HIT000494036"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="tongue"
CDS 11..1297
/codon_start=1
/note="highly similar to Mitochondrial 28S ribosomal
protein S27"
/protein_id="BAG61394.1"
/transl_table=1
/translation="MAASIVRRGMLLARQVVLPQLSPAGKRYLLSSAYVDSHKWEARE
KEHYCLADLASLMDKTFERKLPVSSLTISRLIDNISSREEIDHAEYYLYKKGECSSSN
PQNYSRFRHSPNCWYLRNWTIHTWIRQCLKYDAQDKALYTLVNKVQYGIFPDNFTFNL
LMDSFIKKENYKDALSVVFEVMMQEAFEVPSTQLLSLYVLFHCLAKKTDFSWEEERNF
GASLLLPGLKQKNSVGFSSQLYGYALLGKVELQQGLRAVYHNMPLIWKPGYLDRALQV
MEKVAASPEDIKLCREALDVLGAVLKALTSADGASEEQSQNDEDNQGSEKLVEQLDIE
ETEQSKLPQYLERFKALHSKLQALGKIESEGLLSLTTQLVKEKLSTCEAEDIATYEQN
LQQWHLDLVQLIQREQQQREQAKQEYQAQKAAKASA"
BASE COUNT 401 a 318 c 322 g 328 t
ORIGIN
1 acgctccaag atggctgcct ccatagtgcg gcgcgggatg ctcctggcgc ggcaagtggt
61 tcttcctcag ctctctcctg caggtaaaag atacctgctt tcttcagcct atgtagacag
121 ccacaaatgg gaagcaagag aaaaagaaca ttactgtctt gctgatcttg catctttaat
181 ggataaaaca tttgagagaa agttgcctgt tagttcttta acaatatcac ggcttataga
241 caacatttcc tctcgggaag agatagatca tgcagagtat tacctttaca aaaagggaga
301 atgctcatcc agcaatccac agaattattc caggtttcga cacagcccca actgctggta
361 cctgagaaac tggactatcc acacctggat taggcagtgt ctaaaatatg atgcacaaga
421 caaagcccta tatacccttg taaataaggt tcaatatgga atttttccag ataactttac
481 attcaattta ctgatggatt ctttcataaa gaaagaaaat tacaaagatg ctttatctgt
541 ggtttttgag gtcatgatgc aagaagcctt tgaagtgcct tccacccaac ttctctccct
601 ctatgtttta tttcattgcc tggcaaagaa gacagacttc agttgggaag aggagaggaa
661 ctttggtgca tcccttttgc ttccaggcct aaaacaaaag aactcagtgg gtttcagttc
721 ccagttgtat ggctatgcac ttcttgggaa ggtggagttg cagcaagggc tacgggctgt
781 gtaccacaac atgcctctga tatggaaacc aggctacctt gacagagccc ttcaagtgat
841 ggagaaagtg gctgcctccc cagaagacat aaagctgtgt agagaagcgc tcgatgtgct
901 gggtgcagtg ctgaaggctc tgacttcagc tgatggggct tcagaggagc agtcccaaaa
961 tgatgaagac aaccaggggt cagaaaaact ggtggagcag ttagacatcg aggaaacaga
1021 gcagtccaag cttcctcaat acctggaacg atttaaggcc ttacattcta agcttcaagc
1081 tctgggcaaa attgagtcag aaggtctttt aagtctgacc acccagcttg tcaaggaaaa
1141 actctccacc tgtgaagcag aggacatcgc cacctatgag cagaatctgc agcagtggca
1201 tctagacctt gtacagttga tccagagaga acagcaacag agggagcaag cgaagcagga
1261 gtaccaggct cagaaagcag caaaggcatc tgcctaatag ggtcccccag ggccccacct
1321 gtctcacaag aacttcactc aaccccgtgc caggactcag cagtggcct
//