LOCUS AK299400 1790 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ58275 complete cds, highly similar to
Keratin, type II cytoskeletal 4.
ACCESSION AK299400
VERSION AK299400.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1790)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1790
/clone="NTONG2002737"
/clone_lib="NTONG2"
/db_xref="H-InvDB:HIT000494024"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="tongue"
CDS 59..1621
/codon_start=1
/note="highly similar to Keratin, type II cytoskeletal 4"
/protein_id="BAG61384.1"
/transl_table=1
/translation="MIARQQCVRGGPRGFSCGSAIVGGGKRGAFSSVSMSGGAGRCSS
GGFGSRSLYNLRGNKSISMSVAGLRQGACFGGAGGFGTGGFGGGFGDSFSGKGGPGFP
VCPAGGIQEVTINQSLLTPLHVEIDPEIQKVRTEEREQIKLLNNKFASFIDKVQFLEQ
QNKVLETKWNLLQQQTTTTSSKNLEPLFETYLSVLRKQLDTLGNDKGRLQSELKTMQD
SVEDFKTKYEEEINKRTAAENDFVVLKKDVDAAYLNKVELEAKVDSLNDEINFLKVLY
DAELSQMQTHVSDTSVVLSMDNNRNLDLDSIIAEVRAQYEEIAQRSKAEAEALYQTKV
QQLQISVDQHGDNLKNTKSEIAELNRMIQRLRAEIENIKKQCQTLQVSVADAEQRGEN
ALKDAHSKRVELEAALQQAKEELARMLREYQELMSVKLALDIEIATYRKLLEGEEYRM
SGECQSAVSISVVSGSTSTGGISGGLGSGSGFGLSSGFGSGSGSGFGFGGSVSGSSSS
KIISTTTLNKRR"
BASE COUNT 415 a 482 c 530 g 363 t
ORIGIN
1 actcaccggc ctgggccctg tcacttctct gatagctccc agctcgctct ctgcagccat
61 gattgccaga cagcagtgtg tccgaggcgg gccccggggc ttcagctgtg gctcggccat
121 tgtaggcggt ggcaagagag gtgccttcag ctcagtctcc atgtctggag gtgctggccg
181 atgctcttct gggggatttg gcagcagaag cctctacaac ctcaggggga acaaaagcat
241 ctccatgagt gtggctgggt tacgacaagg tgcctgcttt gggggtgctg gaggctttgg
301 cactggtggc tttggtggtg gatttgggga ctccttcagt ggtaagggtg gccctggctt
361 ccccgtctgc cccgctgggg gaattcagga ggtcaccatc aaccagagct tgctcacccc
421 cctccacgtg gagattgacc ctgagatcca gaaagtccgg acggaagagc gcgaacagat
481 caagctcctc aacaacaagt ttgcctcctt catcgacaag gtgcagttct tagagcaaca
541 gaataaggtc ctggagacca aatggaacct gctccagcag cagacgacca ccacctccag
601 caaaaacctt gagcccctct ttgagaccta cctcagtgtc ctgaggaagc agctagatac
661 cttgggcaat gacaaagggc gcctgcagtc tgagctgaag accatgcagg acagcgtgga
721 ggacttcaag actaagtatg aagaggagat caacaaacgc acagcagccg agaatgactt
781 tgtggtccta aagaaggacg tggatgctgc ctacctgaac aaggtggagt tggaggccaa
841 ggtggacagt cttaatgacg agatcaactt cctgaaggtc ctctatgatg cggagctgtc
901 ccagatgcag acccatgtca gcgacacgtc cgtggtcctt tccatggaca acaaccgcaa
961 cctggacctg gacagcatta ttgccgaggt ccgtgcccag tacgaggaga ttgcccagag
1021 gagcaaggct gaggctgaag ccctgtacca gaccaaggtc cagcagctcc agatctcggt
1081 tgaccaacat ggtgacaacc tgaagaacac caagagtgaa attgcagagc tcaacaggat
1141 gatccagagg ctgcgggcag agatcgagaa catcaagaag cagtgccaga ctcttcaggt
1201 atccgtggct gatgcagagc agcgaggtga gaatgccctt aaagatgccc acagcaagcg
1261 cgtagagctg gaggctgccc tgcagcaggc caaggaggag ctggcacgaa tgctgcgtga
1321 gtaccaggag ctcatgagtg tgaagctggc cttggacatc gagatcgcca cctaccgcaa
1381 actgctggag ggcgaggagt acagaatgtc tggagaatgc cagagtgccg tgagcatctc
1441 tgtggtcagc ggtagcacca gcactggagg catcagcgga ggattaggaa gtggctccgg
1501 gtttggcctg agtagtggct ttggctccgg ctctggaagt ggctttgggt ttggtggcag
1561 tgtctctggc agttccagca gcaagatcat ctctaccacc accctgaaca agagacgata
1621 gaggagacga ggtccctgca gctcactgtg tccagctggg cccagcacta gtgtctctgt
1681 gcttccttca cttcacctcc atcctctgtc tctggggctc atcttactag tatcccctcc
1741 actatcccat gggctctctc tgccccagga tgatcttctg tgctgggaca
//