LOCUS AK299394 2055 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ59399 complete cds, highly similar to
Keratin, type II cytoskeletal 4.
ACCESSION AK299394
VERSION AK299394.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2055)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2055
/clone="NTONG2002043"
/clone_lib="NTONG2"
/db_xref="H-InvDB:HIT000494018"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="tongue"
CDS 59..1564
/codon_start=1
/note="highly similar to Keratin, type II cytoskeletal 4"
/protein_id="BAG61379.1"
/transl_table=1
/translation="MIARQQCVRGGPRGFSCGSAIVGGGKRGAFSSVSMSGGAGRCSS
GGFGTGGFGAGGFGAGFGTGGFGGGFGGSFSGKGGPGFPVCPAGGIQEVTINQSLLTP
LHVEIDPEIQKVRTEEREQIKLLNNKFASFIDKVQFLEQQNKVLETKWNLLQQQTTTT
SSKNLEPLFETYLSVLRKQLDTLGNDKGRLQSELKTMQDSVEDFKTKYEEEINKRTAA
ENDFVVLKKDVDAAYLNKVELEAKVDSLNDEINFLKVLYDAELSQMQTHVSDTSVVLS
MDNNRNLDLDSIIAEVRAQYEEIAQRSKAEAEALYQTKVQQLQISVDQHGDNLKNTKS
EIAELNRMIQRLRAEIENIKKQCQTLQVSVADAEQRGENALKDAHSKRVELEAALQQA
KEELARMLREYQELMSVKLALDIEIATYRKLLEGEEYRMSGECQSAVSISVVSGSTST
GGISGGLGSGSGFGLSSGFGSGSGSGFGFGGSVSGSSSSKIISTTTLNKRR"
BASE COUNT 467 a 566 c 582 g 440 t
ORIGIN
1 actcaccggc ctgggccctg tcacttctct gatagctccc agctcgctct ctgcagccat
61 gattgccaga cagcagtgtg tccgaggcgg gccccggggc ttcagctgtg gctcggccat
121 tgtaggcggt ggcaagagag gtgccttcag ctcagtctcc atgtctggag gtgctggccg
181 atgctcttct gggggatttg gcactggtgg ctttggtgcc ggcggcttcg gagctggttt
241 cggcactggt ggctttggtg gtggatttgg gggctccttc agtggtaagg gtggccctgg
301 cttccccgtc tgccccgctg ggggaattca ggaggtcacc atcaaccaga gcttgctcac
361 ccccctccac gtggagattg accctgagat ccagaaagtc cggacggaag agcgcgaaca
421 gatcaagctc ctcaacaaca agtttgcctc cttcatcgac aaggtgcagt tcttagagca
481 acagaataag gtcctggaga ccaaatggaa cctgctccag cagcagacga ccaccacctc
541 cagcaaaaac cttgagcccc tctttgagac ctacctcagt gtcctgagga agcagctaga
601 taccttgggc aatgacaaag ggcgcctgca gtctgagctg aagaccatgc aggacagcgt
661 ggaggacttc aagactaagt atgaagagga gatcaacaaa cgcacagcag ccgagaatga
721 ctttgtggtc ctaaagaagg acgtggatgc tgcctacctg aacaaggtgg agttggaggc
781 caaggtggac agtcttaatg acgagatcaa cttcctgaag gtcctctatg atgcggagct
841 gtcccagatg cagacccatg tcagcgacac gtccgtggtc ctttccatgg acaacaaccg
901 caacctggac ctggacagca ttattgccga ggtccgtgcc cagtacgagg agattgccca
961 gaggagcaag gctgaggctg aagccctgta ccagaccaag gtccagcagc tccagatctc
1021 ggttgaccaa catggtgaca acctgaagaa caccaagagt gaaattgcag agctcaacag
1081 gatgatccag aggctgcggg cagagatcga gaacatcaag aagcagtgcc agactcttca
1141 ggtatccgtg gctgatgcag agcagcgagg tgagaatgcc cttaaagatg cccacagcaa
1201 gcgcgtagag ctggaggctg ccctgcagca ggccaaggag gagctggcac gaatgctgcg
1261 tgagtaccag gagctcatga gtgtgaagct ggccttggac atcgagatcg ccacctaccg
1321 caaactgctg gagggcgagg agtacagaat gtctggagaa tgccagagtg ccgtgagcat
1381 ctctgtggtc agcggtagca ccagcactgg aggcatcagc ggaggattag gaagtggctc
1441 cgggtttggc ctgagtagtg gctttggctc cggctctgga agtggctttg ggtttggtgg
1501 cagtgtctct ggcagttcca gcagcaagat catctctacc accaccctga acaagagacg
1561 atagaggaga cgaggtccct gcagctcact gtgtccagct gggcccagca ctggtgtctc
1621 tgtgcttcct tcacttcacc tccatcctct gtctctgggg ctcatcttac tagtatcccc
1681 tccactatcc catgggctct ctctgcccca ggatgatctt ctgtgctggg acagggactc
1741 tgcctcttgg agtttggtag ctacttcttg atttgggcct ggtgacccac ctggaatggg
1801 aaggatgtca gctgacctct cacctcccat gggcagagaa gaaaatgacc aggagtgtca
1861 tctccagaat tattggggtc acatatgtcc cttcccagtc caatgccatc tcccactaga
1921 tcctgtatta tccatctaca tcagaaccaa actacttctc caacacccgg cagcacttgg
1981 ccctgcaagc ttaggatgag aaccacttag tgtcccattc tactcctctc attccctctt
2041 atccatctgc aggtg
//