LOCUS AK299386 2048 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ53910 complete cds, highly similar to
Keratin, type II cytoskeletal 6A.
ACCESSION AK299386
VERSION AK299386.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2048)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2048
/clone="NTONG2000705"
/clone_lib="NTONG2"
/db_xref="H-InvDB:HIT000494010"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="tongue"
CDS 69..1676
/codon_start=1
/note="highly similar to Keratin, type II cytoskeletal 6A"
/protein_id="BAG61372.1"
/transl_table=1
/translation="MASTSTTIRSHSSSRRGFSANSARLPGVSRSGFSSVSVSRSRGS
GGLGGACGGAGFGSRSLYGLGGSKRISIGGGSCAISGGYGSRAGGSYGFGGPGFPVCP
PGGIQEVTVNQSLLTPLNLQIDPTIQRVRAEEREQIKTLNNKFASFIDKVRFLEQQNK
VLETKWTLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSIVGERGRLDSELRGMQDLVE
DFKNKYEDEINKRTAAENEFVTLKKDVDAAYMNKVELQAKADTLTDEINFLRALYDAE
LSQMQTHISDTSVVLSMDNNRNLDLDSIIAEVKAQYEEIAQRSRAEAESWYQTKYEEL
QVTAGRHGDDLRNTKQEIAEINRMIQRLRSEIDHVKKQCANLQAAIADAEQRGEMALK
DAKNKLEGLEDALQKAKQDLARLLKEYQELMNVKLALDVEIATYRKLLEGEECRLYGE
GVGQVNISVLQSTVSSGYGGASGVGSGLGLGGGSSYSYGSGLGVGGGFSSSSGRAIGG
GLSSVGGGSSTIKYTTTSSSSRKSYKH"
BASE COUNT 463 a 583 c 583 g 419 t
ORIGIN
1 gtcctgcttc tcttccctct ctcctccagc ctctcacact ctcctcagct ctctcatctc
61 ctggaaccat ggccagcaca tccaccacca tcaggagcca cagcagcagc cgccggggtt
121 tcagtgccaa ctcagccagg ctccctgggg tcagccgctc tggcttcagc agcgtctccg
181 tgtcccgctc caggggcagt ggtggcctgg gtggtgcatg tggaggagct ggctttggca
241 gccgcagtct gtatggcctg gggggctcca agaggatctc cattggaggg ggcagctgtg
301 ccatcagtgg cggctatggc agcagagccg gaggcagcta tggctttggg ggccctggct
361 tccctgtgtg cccccctgga ggcatccaag aggtcaccgt caaccagagt ctcctgactc
421 ccctcaacct gcaaatcgat cccaccatcc agcgggtgcg ggccgaggag cgtgagcaga
481 tcaagaccct caacaacaag tttgcctcct tcatcgacaa ggtgcggttc ctggagcagc
541 agaacaaggt tctggaaaca aagtggaccc tgctgcagga gcagggcacc aagactgtga
601 ggcagaacct ggagccgttg ttcgagcagt acatcaacaa cctcaggagg cagctggaca
661 gcattgtcgg ggaacggggc cgcctggact cagagctcag aggcatgcag gacctggtgg
721 aggacttcaa gaacaaatat gaggatgaaa tcaacaagcg cacagcagca gagaatgaat
781 ttgtgactct gaagaaggat gtggatgctg cctacatgaa caaggttgaa ctgcaagcca
841 aggcagacac tctcacagac gagatcaact tcctgagagc cttgtatgat gcagagctgt
901 cccagatgca gacccacatc tcagacacat ctgtggtgct gtccatggac aacaaccgca
961 acctggacct ggacagcatc atcgctgagg tcaaggccca atatgaggag attgctcaga
1021 gaagccgggc tgaggctgag tcctggtacc agaccaagta cgaggagctg caggtcacag
1081 caggcagaca tggggacgac ctgcgcaaca ccaagcagga gattgctgag atcaaccgca
1141 tgatccagag gctgagatct gagatcgacc acgtcaagaa gcagtgcgcc aacctgcagg
1201 ccgccattgc tgatgctgag cagcgtgggg agatggccct caaggatgcc aagaacaagc
1261 tggaagggct ggaggatgcc ctgcagaagg ccaagcagga cctggcccgg ctgctgaagg
1321 agtaccagga gctgatgaat gtcaagctgg ccctggacgt ggagatcgcc acctaccgca
1381 agctgctgga gggtgaggag tgcaggctgt atggcgaagg cgttggacaa gtcaacatct
1441 ctgtgttgca gtccaccgtc tccagtggct atggcggtgc cagtggtgtc ggcagtggct
1501 taggcctggg tggaggaagc agctactcct atggcagtgg tcttggcgtt ggaggtggct
1561 tcagttccag cagtggcaga gccattgggg gtggcctcag ctctgttgga ggcggcagtt
1621 ccaccatcaa gtacaccacc acctcctcct ccagcaggaa gagctataag cactaaagtg
1681 cgtctgctag ctctcggtcc cacagtcctc aggcccctct ctggctgcag agccctctcc
1741 tcaggttgcc tgtcctctcc tggcctccag tctcccctgc tgtcccaggt agagctgggg
1801 atgaatgctt agtgccctca cttcttctct ctctctctat accatctgag cacccattgc
1861 tcaccatcag atcaacctct gattttacat catgatgtaa tcaccactgg agcttcactg
1921 ttactaaatt attaatttct tgcctccagt gttctatctc tgaggctgag cattataaga
1981 aaatgacctc tgctcctttt cattgcagaa aattgccagg ggcttatttc agaacaactt
2041 ccacttac
//