LOCUS AK299326 1549 bp mRNA linear HUM 24-JUL-2008 DEFINITION Homo sapiens cDNA FLJ50182 complete cds, highly similar to BRCA1-associated protein (EC 6.3.2.-). ACCESSION AK299326 VERSION AK299326.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1549) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..1549 /cell_line="NT2" /cell_type="teratocarcinoma" /clone="NT2RP8005061" /clone_lib="NT2RP8" /db_xref="H-InvDB:HIT000493950" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /note="mRNA from NT2 neuronal precursor cells after 5-weeks retinoic acid (RA) induction." /organism="Homo sapiens" CDS 48..1289 /codon_start=1 /note="highly similar to BRCA1-associated protein (EC 6.3.2.-)" /protein_id="BAG61333.1" /transl_table=1 /translation="MHLYKTNKMTSLKEDVRRSAMLCILTVPAAMTSHDLMKFVAPFN EVIEQMKIIRDSTPNQYMVLIKFRAQGASLPVMDLTELPKCTVCLERMDESVNGILTT LCNHSFHSQCLQRWDDTTCPVCRYCQTPEPVEENKCFECGVQENLWICLICGHIGCGR YVSRHAYKHFEETQHTYAMQLTNHRVWDYAGDNYVHRLVASKTDGKIVQYECEGDTCQ EEKIDALQLEYSYLLTSQLESQRIYWENKIVRIEKDTAEEINNMKTKFKETIEKCDNL EHKLNDLLKEKQSVERKCTQLNTKVAKLTNELKEEQEMNKCLRANQVLLQNKLKEEER VLKETCDQKDLQITEIQEQLRDVMFYLETQQKINHLPAETRQEIQEGQINIAMASASS PASSGGSGKLPSRKGRSKRGK" BASE COUNT 473 a 335 c 392 g 349 t ORIGIN 1 tttcattctt cagtggaaat ccatcagttg aaatagttca tggtattatg cacctatata 61 agacaaataa gatgacctcc ttaaaagaag atgtgcggcg cagtgccatg ctgtgtattc 121 tcacagtccc tgctgcaatg accagtcatg accttatgaa gtttgttgcc ccatttaacg 181 aagtaattga acaaatgaaa attatcagag actctactcc caaccaatat atggtgctga 241 taaagtttcg tgcacagggc gccagcctcc cagtgatgga cctgactgaa ctccccaagt 301 gcacggtgtg tctggagcgc atggacgagt ctgtgaatgg catcctcaca acgttatgta 361 accacagctt ccacagccag tgtctacagc gctgggacga taccacgtgt cctgtttgcc 421 ggtactgtca aacgcccgag ccagtagaag aaaataagtg ttttgagtgt ggtgttcagg 481 aaaatctttg gatttgttta atatgcggcc acataggatg tggacggtat gtcagtcgac 541 atgcttataa gcactttgag gaaacgcagc acacgtatgc catgcagctt accaaccatc 601 gagtctggga ctatgctgga gataactatg ttcatcgact ggttgcaagt aaaacagatg 661 gaaaaatagt acagtatgaa tgtgaggggg atacttgcca ggaagagaaa atagatgcct 721 tacagttaga gtattcatat ttactaacaa gccagctgga atctcagcga atctactggg 781 aaaacaagat agttcggata gagaaggaca cagcagagga aattaacaac atgaagacca 841 agtttaaaga aacaattgag aagtgtgata atctagagca caaactaaat gatctcctaa 901 aagaaaagca gtctgtggaa agaaagtgca ctcagctaaa cacaaaagtg gccaaactca 961 ccaacgagct caaagaggag caggaaatga acaagtgttt gcgagccaac caagtcctcc 1021 tgcagaacaa gctaaaagag gaggagaggg tgctgaagga gacctgtgac caaaaagatc 1081 tgcagatcac cgagatccag gagcagctgc gtgacgtcat gttctacctg gagacacagc 1141 agaagatcaa ccatctgcct gccgagaccc ggcaggaaat ccaggaggga cagatcaaca 1201 tcgccatggc ctcggcctcg agccctgcct cttcgggggg cagtgggaag ttgccctcca 1261 ggaagggccg cagcaagagg ggcaagtgac cttcagagca acagacatcc ctgagactgt 1321 tctccctgac actgtgagag tgtgctggga ccttcagcta aatgtgaggg tgggccctaa 1381 taagtacaag tgaggatcaa gccacagttg tttggctctt tcatttgcta gtgtgtgatg 1441 tagtgaatgt aaagggtgct gactggagag ctgatagaaa ggcgctgcgt tcgaaaaggt 1501 cttaagagtt cactaacctc acattctaat gaccattttg ccttcctgc //