LOCUS AK299317 1420 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ50630 complete cds, highly similar to Homo
sapiens src family associated phosphoprotein 2 (SCAP2), mRNA.
ACCESSION AK299317
VERSION AK299317.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1420)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1420
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP8004592"
/clone_lib="NT2RP8"
/db_xref="H-InvDB:HIT000493941"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
5-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 620..1183
/codon_start=1
/note="highly similar to Homo sapiens src family
associated phosphoprotein 2 (SCAP2), mRNA"
/protein_id="BAH12999.1"
/transl_table=1
/translation="MNNTLRKDGKKDCCFEISAPDKRIYQFTAASPKDAEEWVQQLKF
VLQDMESDIIPEDYDERGELYDDVDHPLPISNPLTSSQPIDDEIYEELPEEEEDSAPV
KVEEQRKMSQDSVHHTSGDKSTDYANFYQGLWDCTGAFSDELSFKRGDVIYILSKEYN
RYGWWVGEMKGAIGLVPKAYIMEMYDI"
BASE COUNT 455 a 242 c 331 g 392 t
ORIGIN
1 agagctggag catctcgcag ccctacaact tctttgcggc gcttggtctg tctttgcgtt
61 gcgagatcag gatcggtgtg ttgctcagac accggccgaa cgccaccggc acgtctagga
121 gtctcctgtg cctggaagag gctggtttca ttcgattcta aaagaaacgg atgttgaaac
181 atttgtagca gatatactga aaggagaaaa tttatccaag aaagcaaagg aaaagagaga
241 atcccttatt aagaagataa aagatgtaaa gtctatctat cttcaggaat ttcaagacaa
301 aggtgatgca gaagatgggg aagaatatga tgaccctttt gctgggcctc cagacactat
361 ttcattagcc tcagaacgat atgataaaga cgatgaagcc ccctctgatg gagcccagtt
421 tcctccaatt gcagcacaag accttccttt tgttctaaag gctggctacc ttgaaaaacg
481 cagaaaagat cacagctttc tgggatttga atggcagaaa cggtggtgtg ctctcagtaa
541 aacggtattc tattattatg gaagtgataa agacaaacaa cagaaaggtg aatttgcaat
601 agatggctac agtgtcagaa tgaataacac tctaagaaag gatggaaaga aagattgctg
661 ttttgaaatc tctgctcctg ataaacgtat atatcagttt acagcagctt ctcccaaaga
721 tgctgaagaa tgggtacagc agctgaaatt tgtattgcaa gatatggaat ctgatattat
781 tcctgaggat tatgatgaga gaggagaatt atatgatgat gttgatcatc ctctaccaat
841 aagcaatcca ctaacaagca gtcaaccaat agatgatgaa atttatgaag aacttccaga
901 agaagaagag gacagtgctc cagtgaaagt ggaagaacaa aggaagatga gtcaggatag
961 tgtccatcac acctcagggg ataagagcac tgattatgct aatttttacc agggattgtg
1021 ggattgtact ggagcttttt ctgatgagtt gtcatttaag cgtggtgatg tgatttacat
1081 tcttagcaag gaatacaata gatatggctg gtgggtagga gaaatgaagg gagccattgg
1141 cttggtgcct aaagcctaca taatggagat gtatgatatt tgagagtcct ggaaaaggaa
1201 aattcttctg cttgtctgca aatgctctgg atttagaagc gtcatgaaag cacgagtgac
1261 agctcctaac ctctccttgt tttattaaac attacttatc tttgactgtt attttatgca
1321 gtcgctcatt aaaatattcc tctgatgtga aattaaatga aggatattaa tgtaaattag
1381 atgcaaccag ttaagttata cctgttgcta ttttgcaaag
//