LOCUS AK299294 1071 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ55033 complete cds, highly similar to Homo
sapiens PAP associated domain containing 5 (PAPD5), transcript
variant 1, mRNA.
ACCESSION AK299294
VERSION AK299294.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1071)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1071
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP8002665"
/clone_lib="NT2RP8"
/db_xref="H-InvDB:HIT000493918"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
5-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 129..944
/codon_start=1
/note="highly similar to Homo sapiens PAP associated
domain containing 5 (PAPD5), transcript variant 1, mRNA"
/protein_id="BAG61309.1"
/transl_table=1
/translation="MLDGYRPSMLYIEDPLQPGNDVGRSSYGAMQVKQAFDYAYVVLS
HAVSPIAKYYPNNETESILGRIIRVTDEVATYRDWISKQWGLKNRPEPSCNGNGVTLI
VDTQQLDKCNNNLSEENEALGKCRSKTSESLSKHSSNSSSGPVSSSSATQSSSSDVDS
DATPCKTPKQLLCRPSTGNRVGSQDVSLESSQAVGKMQSTQTTNTSNSTNKSQHGSAR
LFRSSSKGFQGTTQTSHGSLMTNKQHQGKSNNQYYHGKKRKHKRDAPLSDLCR"
BASE COUNT 342 a 234 c 230 g 265 t
ORIGIN
1 atacaaacta tggtgttctc ttaatagaat tttttgaatt atatggacga cacttcaatt
61 atttaaagac tggcatccgg ataaaggatg gtggttcata tgtggccaaa gatgaagtac
121 agaaaaatat gctagatggc tacaggccat caatgcttta tatcgaagat cctttacaac
181 caggtaacga tgttggaagg agttcatatg gggccatgca agtgaagcag gcctttgatt
241 atgcctacgt tgttttgagt catgctgtat caccaatagc aaagtactat cccaacaatg
301 aaacagaaag catactaggt agaataatta gagtaacaga tgaagttgcc acatatagag
361 attggatatc aaagcagtgg ggcttgaaga atagacctga gccttcatgc aatggaaatg
421 gtgttacctt gatagtagat actcagcagt tagataaatg taataataat ctatctgaag
481 aaaatgaagc ccttggaaaa tgtagaagta aaacctcgga atctcttagt aaacactctt
541 caaactcttc atcaggtcca gtgtcgtcct cttctgccac acagtccagc tctagtgatg
601 tagattccga tgcaacacca tgcaaaaccc cgaaacagct gctttgccgt ccgtccactg
661 ggaaccgagt agggtcgcaa gatgtatcct tggagtcctc tcaggcagtt gggaaaatgc
721 aaagcaccca aaccactaac acatccaaca gcaccaacaa atctcagcat ggatcagcaa
781 ggctctttcg ttcttccagc aaaggcttcc aaggtacaac tcaaacaagc catggttcct
841 tgatgacaaa caaacaacat caaggcaaat ccaataatca gtattaccat ggcaaaaaga
901 ggaaacacaa gagggacgcg cccctctcag acctctgtag atagtcagcg ctgcgcggtg
961 gactgtcttc tctgtgcaat gatctcatgc tcaggacagt tgcgcaggga ctcctgggag
1021 atattcagga gcctcacact gttcagacgt tgacttagca actgcgtttt t
//