LOCUS AK299287 1840 bp mRNA linear HUM 24-JUL-2008 DEFINITION Homo sapiens cDNA FLJ55041 complete cds, highly similar to 2-hydroxyphytanoyl-CoA lyase (EC 4.1.-.-). ACCESSION AK299287 VERSION AK299287.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1840) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..1840 /cell_line="NT2" /cell_type="teratocarcinoma" /clone="NT2RP8001902" /clone_lib="NT2RP8" /db_xref="H-InvDB:HIT000493911" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /note="mRNA from NT2 neuronal precursor cells after 5-weeks retinoic acid (RA) induction." /organism="Homo sapiens" CDS 492..1694 /codon_start=1 /note="highly similar to 2-hydroxyphytanoyl-CoA lyase (EC 4.1.-.-)" /protein_id="BAG61303.1" /transl_table=1 /translation="MERCMSPPISMAETSAVCTAASVIRNAKQPLLIIGKGAAYAHAE ESIKKLVEQYKLPFLPTPMGKGVVPDNHPYCVGAARSRALQFADVIVLFGARLNWILH FGLPPRYQPDVKFIQVDICAEELGNNVKPAVTLLGNIHAVTKQLLEELDKTPWQYPPE SKWWKTLREKMKSNEAASKELASKKSLPMNYYTVFYHVQEQLPRDCFVVSEGANTMDI GRTVLQNYLPRHRLDAGTFGTMGVGLGFAIAAAVVAKDRSPGQWIICVEGDSAFGFSG MEVETICRYNLPIILLVVNNNGIYQGFDTDTWKEMLKFQDATAVVPPMCLLPNSHYEQ VMTAFGGKGYFVQTPEELQKSLRQSLADTNKPSLINIMIEPQATRKAQPFPAWIRRSV VATKHAAC" BASE COUNT 488 a 424 c 466 g 462 t ORIGIN 1 agaggtgcag taccagaggt ggcgtgctgc cgacttcgcg tttgccttgc tggatgattc 61 cgcttgtttg ccggctgcgt gagtgcttag agcttttcgg tggaagatgc cggacagtaa 121 cttcgcagag cgcagcgagg agcaggtgtc tggtgctaaa gtcatcgctc aggccctgaa 181 aacgcaagat gtggagtaca tatttggcat cgtaggcatc ccagtgaccg aaatcgccat 241 tgctgcccag cagctaggca tcaagtacat cgggatgagg aatgagcaag cggcttgtta 301 tgctgcctcc gcgattggat atctgacaag caggccagga gtctgccttg ttgtttctgg 361 cccaggtctc atccatgcct tgggcggtat ggcaaatgca aacatgaact gctggccctt 421 gcttgtgatt ggtggttcct ctgaaagaaa ccaagaaaca atgggagctt tccaggagtt 481 tcctcaggta catggaacgc tgcatgtcac ctcctattag catggcagaa acctctgctg 541 tgtgcacggc ggcttctgtt attaggaatg ccaaacaacc ccttcttatc atcgggaaag 601 gtgctgctta cgctcatgca gaagagagta tcaagaaatt ggtggagcaa tataaactgc 661 catttttgcc cacccctatg gggaagggtg ttgtccctga caaccatcca tactgtgtag 721 gtgcagccag atccagggct ttgcaatttg ctgatgtaat tgtgttattt ggtgccagac 781 taaattggat tttacatttt ggactgcctc caagatatca gccagatgtg aagtttatcc 841 aggttgatat ctgtgcagaa gaattgggga ataatgtaaa gcccgctgtt actttgctag 901 gaaacataca tgctgtcact aagcagcttt tagaggaact tgataaaaca ccatggcagt 961 atcctccaga gagcaagtgg tggaaaactc tgagagaaaa aatgaagagc aatgaagctg 1021 catccaagga actagcttct aaaaaatccc tacctatgaa ttattacaca gtattctacc 1081 atgttcaaga acaactacct agagactgtt tcgtggtaag tgaaggagca aatactatgg 1141 acattggacg gactgtgctt cagaactacc ttcctcgtca caggcttgat gctggtactt 1201 tcggaacaat gggagttggt ttgggatttg ctattgcagc tgccgtggtg gctaaagata 1261 gaagccctgg gcaatggatc atctgtgtgg aaggagacag tgcatttggg ttttctggca 1321 tggaggtaga aaccatctgc aggtacaact tgccaatcat actgttggta gtgaataaca 1381 atggaattta ccaaggtttt gatacagata cttggaaaga aatgttaaaa tttcaagatg 1441 ctactgcagt ggtccctcca atgtgtttgc tgccaaattc acattatgag caagtcatga 1501 ctgcatttgg aggcaaaggg tattttgtac aaacaccaga agaactccaa aaatccctga 1561 ggcagagcct agcagacaca aataaacctt ctcttatcaa catcatgatt gagccacaag 1621 ccacacggaa ggcccagccc ttcccagcct ggatcagaag aagcgtggtg gccacaaagc 1681 atgctgcctg ctgacgcctc ctccaccacc actgttccca ccaccattct tcagaggtgg 1741 ccgaagtccg cttctctccc cagacatgaa gaatctcatg ctggaactgg agacctcgca 1801 gtccccgtgc atgcaaggct cgctaggctc ccctgggcct //