LOCUS AK299285 1895 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ61352 complete cds, weakly similar to
Mesoderm induction early response protein 1.
ACCESSION AK299285
VERSION AK299285.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1895)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1895
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP8001594"
/clone_lib="NT2RP8"
/db_xref="H-InvDB:HIT000493909"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
5-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 4..1656
/codon_start=1
/note="weakly similar to Mesoderm induction early
response protein 1"
/protein_id="BAG61301.1"
/transl_table=1
/translation="MAEASFGSSSPVGSLSSEDHDFDPTAEMLVHDYDDERTLEEEEM
MDEGKNFSSEIEDLEKEGTMPLEDLLAFYGYEPTIPAVANSSANSSPSELADELPDMT
LDKEEIAKDLLSGDDEETQSSADDLTPSVTSHETSDFFPRPLRSNTACDGDKESEVED
VETDSGNSPEDLRKEIMIGLQYQAEIPPYLGEYDGNEKVYENEDQLLWCPDVVLESKV
KEYLVETSLRTGSEKIMDRISAGTHTRDNEQALYELLKCNHNIKEAIERYCCNGKASQ
EGMTAWTEEECRSFEHALMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERYDYFA
QQTRFGKKRYNHHPGVTDYMDRLVDETEALGGTVNASALTSNRPEPIPDQQLNILNSF
TASDLTALTNSVATVCDPTDVNCLDDSFPPLGNTPRGQVNHVPVVTEELLTLPSNGES
DCFNLFETGFYHSELNPMNMCSEESERPAKRLKMGIAVPESFMNEVSVNNLGVDFENH
THHITSAKMAVSVADFGSLSANETNGFISAHALHQHAALHSE"
BASE COUNT 584 a 360 c 442 g 509 t
ORIGIN
1 tatatggcgg aggcttcttt tggaagttcg agcccagttg ggtctttgtc ttctgaggat
61 catgattttg accccactgc tgagatgttg gtccatgact atgatgatga aagaactctt
121 gaagaagagg aaatgatgga tgagggtaaa aacttcagtt cagaaattga agacttagaa
181 aaggaaggaa ccatgcctct agaagattta ctggcattct atggctatga acctacaatt
241 ccagcagttg caaattccag tgcaaatagt tccccaagtg aactggcaga tgaactacca
301 gacatgacac tagacaaaga ggaaatagca aaagacctgt tgtcaggtga tgacgaggaa
361 actcagtctt ctgcggatga tctgacgcca tctgtgactt cccatgaaac ttctgatttc
421 ttccctaggc ctttacgatc aaatactgca tgtgatggtg ataaggaatc agaggttgaa
481 gatgttgaaa cagacagtgg taattcacct gaagatttga ggaaggaaat aatgattggt
541 ttacaatatc aggcagagat tcccccttat cttggagagt acgatggtaa tgagaaagta
601 tatgaaaacg aagaccagtt actttggtgt cctgatgtgg ttttggagag caaagttaag
661 gaataccttg ttgagacttc attaaggact ggcagtgaaa aaataatgga taggatttct
721 gcaggaacac acacaaggga caatgaacag gcattatatg aacttctcaa gtgtaaccac
781 aatataaagg aagcaatcga aagatactgc tgcaatggaa aggcctctca agaaggaatg
841 actgcatgga cggaagaaga atgccgaagc tttgaacatg cactcatgct ttttggaaaa
901 gattttcatc ttatacagaa gaataaggtg agaactagga cagttgctga gtgtgtagca
961 ttctactata tgtggaagaa atctgaacgt tatgattact ttgctcaaca gacaagattt
1021 gggaaaaaaa gatataacca tcaccctgga gttacggact atatggatcg tttagtagat
1081 gaaacagaag ctttgggtgg gacggtaaat gcttcagcct taacttctaa ccggcctgag
1141 cctattcctg atcaacagct aaacattctc aactccttca ctgccagtga cttgacagct
1201 ttgaccaaca gtgtagcaac cgtctgcgac cccacagatg tgaattgttt ggatgatagc
1261 tttcctccac tgggcaacac accccgtgga caagttaatc atgtgcctgt tgtaacagaa
1321 gagttactca ccctgcccag caatggggaa agtgattgtt ttaatttatt tgagactgga
1381 ttttatcact cggagctaaa ccctatgaac atgtgcagtg aagagtcaga gagaccagca
1441 aaaagattga aaatgggcat tgccgtccct gaatccttta tgaatgaagt ttctgtaaat
1501 aacctgggtg tggactttga aaatcacaca catcacatca ccagtgccaa aatggctgtt
1561 tctgtggctg actttggcag tctctctgcc aacgagacca atggtttcat cagtgcccat
1621 gctctgcatc agcacgcggc cctacactct gagtgacctg agtgaggatc ccggaactgc
1681 gtgtgcagca ccagtaaact tgaggggagc tatcaggttt gcatagtctt tcactggaag
1741 tttgaacctt tctcactatg acatcagtga tgtcagtatg tatagaacta tatcttgatt
1801 tatcaagagt attttcattt ttcaatccat aaatgtggaa atgaactatg atcagcagag
1861 ttgggaacta agattgaact ctgtggtgca gcttt
//