LOCUS AK299277 2676 bp mRNA linear HUM 21-JAN-2009 DEFINITION Homo sapiens cDNA FLJ53170 complete cds, highly similar to Protein kinase C-binding protein NELL2 precursor. ACCESSION AK299277 VERSION AK299277.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2676) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..2676 /cell_line="NT2" /cell_type="teratocarcinoma" /clone="NT2RP8000913" /clone_lib="NT2RP8" /db_xref="H-InvDB:HIT000493901" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /note="mRNA from NT2 neuronal precursor cells after 5-weeks retinoic acid (RA) induction." /organism="Homo sapiens" CDS 60..2507 /codon_start=1 /note="highly similar to Protein kinase C-binding protein NELL2 precursor" /protein_id="BAH12990.1" /transl_table=1 /translation="METGLGAPLFKAWLLISVWGLGVDPSLQIDVLTELELGESTTGV RQVPGLHNGTKAFLFQDTPRSIKASTATAEQFFQKLRNKHEFTILVTLKQTHLNSGVI LSIHHLDHRYLELESSGHRNEVRLHYRSGSHRPHTEVFPYILADDKWHKLSLAISASH LILHIDCNKIYERVVEKPSTDLPLGTTFWLGQRNNAHGYFKGIMQDVQLLVMPQGFIA QCPDLNRTCPTCNDFHGLVQKIMELQDILAKTSAKLSRAEQRMNRLDQCYCERTCTMK GTTYREFESWIDGCKNCTCLNGTIQCETLICPNPDCPLKSALAYVDGKCCKECKSICQ FQGRTYFEGERNTVYSSPGVCVLYECKDQTMKLVESSGCPALDCPESHQITLSHSCCK VCKGYDFCSERHNCMENSICRNLNDRAVCSCRDGFRALREDNAYCEDIDECAEGRHYC REDTMCVNTPGSFMCICKTGYIRIDDYSCTEHDECITNQHNCDENALCFNTVGGHNCV CKPGYTGNGTTCKAFCKDGCRNGGACIAANVCACPQGFTGPSCETDIDECSDGFVQCD SRANCINLPGWYHCECRDGYHDNGMFSPSGESCEDIDECGTGRHSCANDTICFNLDGG YDCRCPHGKNCTGDCIHDGKVKHNGQIWVLENDRCSVCSCQNGFVMCRRMVCDCENPT VDLFCCPECDPRLSSQCLHQNGETLYNSGDTWVQNCQQCRCLQGEVDCWPLPCPDVEC EFSILPENECCPRCVTDPCQADTIRNDITKTCLDEMNVVRFTGSSWIKHGTECTLCQC KNGHICCSVDPQCLQEL" BASE COUNT 737 a 550 c 673 g 716 t ORIGIN 1 tagtccaggg tcggagggct gagggggaac tttgcagaga gaagggttta aaggaggtca 61 tggaaacggg actgggtgct ccgctattta aagcttggct gctgatctca gtttgggggc 121 ttggtgtgga cccttcccta cagattgacg tcttaacaga gttagaactt ggggagtcca 181 cgaccggagt gcgtcaggtc ccggggctgc ataatgggac gaaagccttt ctctttcaag 241 atactcccag aagcataaaa gcatccactg ctacagctga acagtttttt cagaagctga 301 gaaataaaca tgaatttact attttggtga ccctaaaaca gacccactta aattcaggag 361 ttattctctc aattcaccac ttggatcaca ggtacctgga actggaaagt agtggccatc 421 ggaatgaagt cagactgcat taccgctcag gcagtcaccg ccctcacaca gaagtgtttc 481 cttacatttt ggctgatgac aagtggcaca agctctcctt agccatcagt gcttcccatt 541 tgattttaca cattgactgc aataaaattt atgaaagggt agtagaaaag ccctccacag 601 acttgcctct aggcacaaca ttttggctag gacagagaaa taatgcgcat ggatatttta 661 agggtataat gcaagatgtc caattacttg tcatgcccca gggatttatt gctcagtgcc 721 cagaccttaa tcgcacctgt ccaacttgca atgacttcca tggacttgtg cagaaaatca 781 tggagctaca ggatatttta gccaaaacat cagccaagct gtctcgagct gaacagcgaa 841 tgaatagatt ggatcagtgc tattgtgaaa ggacttgcac catgaaggga accacctacc 901 gagaatttga gtcctggata gacggctgta agaactgcac atgcctgaat ggaaccatcc 961 agtgtgaaac tctaatctgc ccaaatcctg actgcccact taagtcggct cttgcgtatg 1021 tggatggcaa atgctgtaag gaatgcaaat cgatatgcca atttcaagga cgaacctact 1081 ttgaaggaga aagaaataca gtctattcct ctcctggagt atgtgttctc tatgagtgca 1141 aggaccagac catgaaactt gttgagagtt caggctgtcc agctttggat tgtccagagt 1201 ctcatcagat aaccttgtct cacagctgtt gcaaagtttg taaaggttat gacttttgtt 1261 ctgaaaggca taactgcatg gagaattcca tctgcagaaa tctgaatgac agggctgttt 1321 gtagctgtcg agatggtttt agggctcttc gagaggataa tgcctactgt gaagacatcg 1381 atgagtgtgc tgaagggcgc cattactgtc gtgaagatac aatgtgtgtc aacaccccgg 1441 gttcttttat gtgcatctgc aaaactggat acatcagaat tgatgattat tcatgtacag 1501 aacatgatga gtgtatcaca aatcagcaca actgtgatga aaatgcttta tgcttcaaca 1561 ctgttggagg acacaactgt gtttgcaagc cgggctatac agggaatgga acgacatgca 1621 aagcattttg caaagatggc tgtaggaatg gaggagcctg tattgccgct aatgtgtgtg 1681 cctgcccaca aggcttcact ggacccagct gtgaaacgga cattgatgaa tgctctgatg 1741 gttttgttca atgtgacagt cgtgctaatt gcattaacct gcctggatgg taccactgtg 1801 agtgcagaga tggctaccat gacaatggga tgttttcacc aagtggagaa tcgtgtgaag 1861 atattgatga gtgtgggacc gggaggcaca gctgtgccaa tgataccatt tgcttcaatt 1921 tggatggcgg atatgattgt cgatgtcctc atggaaagaa ttgcacaggg gactgcatcc 1981 atgatggaaa agttaagcac aatggtcaga tttgggtgtt ggaaaatgac aggtgctctg 2041 tgtgctcatg tcagaatgga ttcgttatgt gtcgacggat ggtctgtgac tgtgagaatc 2101 ccacagttga tcttttttgc tgccctgaat gtgacccaag gcttagtagt cagtgcctcc 2161 atcaaaatgg ggaaactttg tataacagtg gtgacacctg ggtccagaat tgtcaacagt 2221 gccgctgctt gcaaggggaa gttgattgtt ggcccctgcc ttgcccagat gtggagtgtg 2281 aattcagcat tctcccagag aatgagtgct gcccgcgctg tgtcacagac ccttgccagg 2341 ctgacaccat ccgcaatgac atcaccaaga cttgcctgga cgaaatgaat gtggttcgct 2401 tcaccgggtc ctcttggatc aaacatggca ctgagtgtac tctctgccag tgcaagaatg 2461 gccacatctg ttgctcagtg gatccacagt gccttcagga actgtgaagt taactgtctc 2521 atgggagatt tctgttaaaa gaatgttctt tcattaaaag accaaaaaga agttaaaact 2581 taaattgggt gatttgtggg cagctaaatg cagctttgtt aatagctgag tgaactttca 2641 attatgaaat ttgtggagct tgacaaaatc acaaaa //