LOCUS AK299274 2847 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ56482 complete cds, highly similar to Zinc
finger protein 484.
ACCESSION AK299274
VERSION AK299274.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2847)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2847
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP8000747"
/clone_lib="NT2RP8"
/db_xref="H-InvDB:HIT000493898"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
5-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 97..2661
/codon_start=1
/note="highly similar to Zinc finger protein 484"
/protein_id="BAG61294.1"
/transl_table=1
/translation="MSVLSLPESVSFKDVTVDFSRDEWQQLDLAQKSLYREVMLENYF
NLISVGCQVPKPEVIFSLEQEEPCMLDGEIPSQSRPDGDIGFGPLQQRMSEEVSFQSE
ININLFTRDDPYSILEELWKDDEHTRKCGENQNKPLSRVVFINKKTLANDSIFEYKDI
GEIVHVNTHLVSSRKRPHNCNSCGKNLEPIITLYNRNNATENSDKTIGDGDIFTHLNS
HTEVTACECNQCGKPLHHKQALIQQQKIHTRESLYLFSDYVNVFSPKSHAFAHESICA
EEKQHECHECEAVFTQKSQLDGSQRVYAGICTEYEKDFSLKSNRQKTPYEGNYYKCSD
YGRAFIQKSDLFRCQRIHSGEKPYEYSECEKNLPQNSNLNIHKKIHTGGKHFECTECG
KAFTRKSTLSMHQKIHTGEKPYVCTECGKAFIRKSHFITHERIHTGEKPYECSDCGKS
FIKKSQLHVHQRIHTGENPFICSECGKVFTHKTNLIIHQKIHTGERPYICTVCGKAFT
DRSNLIKHQKIHTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHYECSECGKAFIQK
STLSMHQRIHRGEKPYVCTECGKAFFHKSHFITHERIHTGEKPYECSICGKSFTKKSQ
LHVHQQIHTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPYKCSDCGKAFTRKSGLH
IHQQSHTGERHYECSECGKAFARKSTLIMHQRIHTGEKPYICNECGKSFIQKSHLNRH
RRIHTGEKPYECSDCGKSFIKKSQLHEHHRIHTGEKPYICAECGKAFTIRSNLIKHQK
IHTKQKPYKCSDLGKALNWKPQLSMPQKSDNGEVECSMPQLWCGDSEGDQGQLSSI"
BASE COUNT 970 a 534 c 610 g 733 t
ORIGIN
1 cccgaggcaa atgaccactg tcctgagagg acgtgggtga ggggcaggtg agtagaggga
61 tggcagcatc tgtggactga gcaagaagaa tctctgatgt ctgtcctgag ccttccggaa
121 tcagtgtcat tcaaggacgt aactgtagac ttcagtaggg atgagtggca acaattagac
181 cttgctcaga aaagcctgta cagagaagtg atgctggaaa actatttcaa cttgatctca
241 gtgggatgtc aagttcccaa accagaagtc atcttcagct tggaacaaga agagccatgt
301 atgttggatg gtgagatccc cagtcagagc cgtccagatg gggacattgg ttttggacct
361 ttacaacaga ggatgtctga agaagtttct ttccagtctg agattaatat taatctcttc
421 acaagagatg acccatattc cattttagaa gaattgtgga aagacgatga acacacaaga
481 aaatgtggag aaaaccagaa caaaccttta agtcgtgttg tcttcattaa caagaaaaca
541 ctagctaatg acagcatctt tgaatataag gacattgggg aaatagttca tgtaaacaca
601 cacctggttt cctcaagaaa aagaccccat aactgtaact cgtgtggaaa gaatttggag
661 cctatcataa ccttatataa tagaaacaat gcaacagaaa attctgataa gactattgga
721 gatggtgata ttttcactca tttgaattct catacagaag tgactgcttg tgaatgtaac
781 caatgtggga aacctctgca tcataagcaa gctctcattc aacaacagaa aattcatact
841 agagagagcc tctatttgtt ttctgactac gtaaatgttt tctccccgaa gtcacatgcc
901 tttgcacatg agagtatttg tgctgaagaa aagcagcatg aatgccatga atgtgaggca
961 gtcttcactc agaagtccca gcttgatggc agtcagaggg tttatgcagg aatatgcact
1021 gaatatgaga aggatttttc cctcaagtca aaccgtcaga aaactcctta tgaggggaat
1081 tactataaat gcagtgacta tggaagagcc tttatccaga agtcagatct gttcaggtgc
1141 cagagaattc attctggaga aaaaccttat gagtacagtg aatgtgagaa aaacctccct
1201 cagaattcaa accttaatat acataaaaaa attcatactg gagggaaaca ctttgaatgt
1261 actgaatgtg gaaaagcttt cacaaggaaa tcaacactaa gtatgcatca gaaaatccat
1321 acaggagaaa aaccttatgt atgtactgaa tgtgggaagg cctttatccg gaagtcacat
1381 tttatcacac atgaaagaat tcatactgga gaaaaaccct atgaatgcag tgactgtggg
1441 aaatccttta ttaaaaaatc acaactccat gtgcatcagc gaattcacac aggagagaat
1501 ccctttatat gttcagaatg tgggaaggtc ttcactcaca agacaaatct cattatacac
1561 cagaaaattc atacaggaga aagaccctat atatgtactg tgtgtggtaa ggcctttact
1621 gacaggtcaa atctcattaa gcaccaaaaa attcatactg gagagaaacc ttataaatgc
1681 agcgactgtg gaaaatcatt cacctggaag tctcggctca ggatacatca gaagtgtcat
1741 actggagaga gacattatga atgcagtgaa tgtgggaaag cattcattca gaagtcaaca
1801 ttaagtatgc accagagaat tcatagaggg gaaaaaccat atgtttgcac tgaatgtggt
1861 aaggccttct tccacaaatc ccattttatt acacatgaga gaattcatac tggagagaaa
1921 ccctatgaat gcagtatttg tgggaaatcc ttcactaaga aatcacagct ccacgtacat
1981 cagcagattc acacaggaga gaaaccctat aggtgtgctg aatgtggaaa ggcttttact
2041 gacagatcaa atctctttac acaccagaaa attcacactg gagagaaacc ttataaatgt
2101 agtgactgtg ggaaagcctt cactaggaag tcaggtctcc atatacatca gcaatcccat
2161 actggagaaa ggcattatga gtgcagtgaa tgtgggaaag cctttgcaag aaaatcaaca
2221 ctaattatgc atcagagaat tcatacagga gagaaaccct atatttgtaa tgaatgtggg
2281 aaatccttca tccagaagtc acacttaaat agacacagga gaattcatac tggagagaaa
2341 ccctatgaat gcagtgactg tggcaagtct ttcattaaga aatcacaact ccatgagcat
2401 catcgaattc acacaggaga gaaaccatat atatgtgctg agtgtggaaa ggccttcacc
2461 atcagatcaa atcttattaa acaccagaaa attcatacta aacagaaacc ctataagtgc
2521 agtgacttgg ggaaagcctt aaactggaag ccacaactca gtatgcctca gaaatctgac
2581 aatggggaag tagagtgctc catgccacaa ttatggtgtg gggactcaga aggtgaccaa
2641 ggccaacttt cttctatcta gttagaatta tgaacatctg gatcatatag ctgatgtgta
2701 gttacacata tggggagaca cttttgagag tgtttaagca atgtatagtg gccatctttg
2761 gttacttgat attggtgttg tcaagctcct gcaaataata gtaaatgtgc aaggagatga
2821 ttggcagtct ttcttgtttc acttttt
//