LOCUS AK299255 1631 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ52733 complete cds, highly similar to Homo
sapiens glycerophosphodiester phosphodiesterase domain containing
2 (GDPD2), mRNA.
ACCESSION AK299255
VERSION AK299255.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1631)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1631
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP7017053"
/clone_lib="NT2RP7"
/db_xref="H-InvDB:HIT000493879"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
5-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 209..1591
/codon_start=1
/note="highly similar to Homo sapiens
glycerophosphodiester phosphodiesterase domain containing
2 (GDPD2), mRNA"
/protein_id="BAG61286.1"
/transl_table=1
/translation="MDWSLAFLLVISLLVTYASLLLVLALLLRLCRQPLHLHSLHKVL
LLLIMLLVAAGLVGLDIQWQQEWHSLRVSLQATAPFLHIGAAAGIALLAWPVADTFYR
IHRRGPKILLLLLFFGVVLVIYLAPLCISSPCIMEPRDLPPKPGLVGHRGAPMLAPEN
TLMSLRKTAECGATVFETDVMVSSDGVPFLMHDEHLSRTTNVASVFPTRITAHSSDFS
WTELKRLNAGSWFLERRPFWGAKPLAGPDQKEAESQTVPALEELLEEAAALNLSIMFD
LRRPPQNHTYYDTFVIQTLETVLNARVPQAMVFWLPDEDRANVQRRAPGMRQIYGRQG
GNRTERPQFLNLPYQDLPLLDIKALHKDNVSVNLFVVNKPWLFSLLWCAGVDSVTTND
CQLLQQMRYPIWLITPQTYLIIWVITNCVSTMLLLWTFLLQRRFVKKRGKTGLETAVL
LTRINNFMME"
BASE COUNT 368 a 462 c 428 g 373 t
ORIGIN
1 acagagcagc tgcaggcctt gggagaggac ccacacagcc tcctgtaggt ggcaacagtg
61 ccacctgttt gactcatagg gctgaaccga ggactgaaaa agggaggagg cagaccactc
121 ggagaggagc tgggaagcag tgcagagagg agagcggagc ggagctgccg ctgagcaaag
181 attcctcttc cgccgctggg gacactggat ggactggtcc ctggcattcc tgctggtcat
241 ctctctactg gtcacatatg catccttgct attggtcctg gccctgctcc tgcggctttg
301 tagacagccc ctgcatctgc acagcctcca caaggtgctg ctgctcctca ttatgctgct
361 tgtggcggct ggccttgtgg gactggacat ccaatggcag caggagtggc atagcttgcg
421 tgtgtcactg caggccacag ccccattcct tcatattgga gcagccgctg gaattgccct
481 cctggcctgg cctgtggctg ataccttcta ccgtatccac cgaagaggtc ccaagattct
541 gctactgctc ctattttttg gagttgtcct ggtcatctac ttggcccccc tatgcatctc
601 ctcaccctgc atcatggaac ccagagactt accacccaag cctgggctgg tgggacaccg
661 aggggccccc atgctggctc ccgagaacac cctgatgtcc ttgcggaaga cagctgaatg
721 cggagctact gtgtttgaga ctgatgtgat ggtcagctcc gatggggtcc ccttcctcat
781 gcatgatgag cacctcagca ggaccacgaa tgtagcctct gtattcccaa cccgaatcac
841 agcccacagc agtgacttct cctggactga actgaagaga ctcaatgctg gatcctggtt
901 cctagagagg cgacccttct ggggggccaa accgctggca ggccctgatc agaaagaggc
961 tgagagtcag acggtaccag cattagaaga gctattggag gaagctgcag ccctcaacct
1021 ttccatcatg ttcgacttgc gccgaccccc acagaaccac acatactatg acacttttgt
1081 gatccagaca ttggagactg tgctgaatgc aagggtgccc caagccatgg tcttttggct
1141 accagatgaa gatcgggcta atgtccaacg acgggcacct ggaatgcgcc agatatatgg
1201 acgtcaggga ggcaacagaa cggagaggcc ccagtttctt aacctcccct atcaagatct
1261 gccactattg gatatcaagg cattgcataa ggataatgtc tcggtgaacc tatttgtagt
1321 gaacaagccc tggctcttct ctctgctttg gtgtgcaggg gtggattcgg tcaccaccaa
1381 cgactgccag ctgctgcagc agatgcgtta ccctatctgg cttattaccc ctcaaaccta
1441 cctaatcata tgggtcatta ccaattgtgt ttccaccatg ctgcttttgt ggaccttcct
1501 cctccaaaga agatttgtta agaagagagg gaaaactggc ttagaaacag cagtgctgct
1561 gacaaggatc aacaatttca tgatggagtg aatgccctgc cctgcttccc cacccaagcc
1621 agtctacatt g
//